AMCG00016794


Basic Information

Item Value
gene id AMCG00016794
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30465157 ~ 30467804 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016794
ATGGGATGGGTCATGTGGAACCTCTATTCTACACTCCTCATTATCTTCCCTCTCATCAGCCTGCCATCCTGCCAGAGTGGGAATATATTGGTGTTTCCAGTGGATGGCAGCCATTGGGTGAACATGAACATCTTGATCCAAGAGCTGCACGCCAGGGGGCACAACCTGACTGTGGTGCGCACCACCAGCACCTGGTACATCCAGGAGAAGTCTCCTCACTACACCTCCATCACCGTTCCCCTTCCCCAGCCCATGAACATCGAGAAGGAAGACTTCTTCATTTCATTCCTAAACCGAATGCTGGAGATCCGCAGGGGAGGGACGTCCTTGATGACTTTCATCACTTTCCACTGGAGAATGATCAGCAGCCTGTCTGAGATTCACAGTCAGGCCAGCCAGCTGGTGGTGACCATGTTTGAAAACCCCCAGCTGATGAAAAGCCTTCAGGACTCTCACTTCGACATTGCCCTCATTGACCCCGGCCTGCCTGGTGGAGTGCTGGTAGCCCACTATCTTCAGCTCCCTGTGGTCTTCAATGTGCGCTGGATTACCAGTGGCGAAGatGTGTTTTAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016794 True 573 mRNA 0.53 2 30465157 30467804

Neighbor

gene id symbol gene type direction distance location
AMCG00016780 NA coding downstream 223588 30236974 ~ 30241569 (-)
AMCG00016779 gosr2,LOC107654523,LOC107721531,LOC107674598 coding downstream 241748 30216244 ~ 30223409 (-)
AMCG00016775 NA coding downstream 290869 30161793 ~ 30174288 (-)
AMCG00016773 NA coding downstream 325466 30123851 ~ 30139691 (-)
AMCG00016774 NA coding downstream 365550 30088847 ~ 30099607 (-)
AMCG00016792 NA coding upstream 83324 30551128 ~ 30557792 (-)
AMCG00016793 NA coding upstream 90452 30558256 ~ 30563594 (-)
AMCG00016801 psmc5,LOC107753303,LOC107745657,LOC106579096 coding upstream 535302 31003106 ~ 31008426 (-)
AMCG00016800 NA coding upstream 544759 31012563 ~ 31015970 (-)
AMCG00016802 LOC105013322 coding upstream 592547 31060351 ~ 31060686 (-)
G15746 NA non-coding downstream 33159 30429929 ~ 30431998 (-)
G15716 NA non-coding downstream 228290 30233548 ~ 30236867 (-)
G15711 NA non-coding downstream 256620 30207687 ~ 30208537 (-)
G15708 NA non-coding downstream 260042 30204822 ~ 30205115 (-)
G15690 NA non-coding downstream 351873 30109453 ~ 30113284 (-)
G15845 NA non-coding upstream 530830 30998634 ~ 31002128 (-)
G15854 NA non-coding upstream 565266 31033070 ~ 31033320 (-)
G15864 NA non-coding upstream 635575 31103379 ~ 31106792 (-)
G15890 NA non-coding upstream 704381 31172185 ~ 31176602 (-)
G15927 NA non-coding upstream 902276 31370080 ~ 31379449 (-)
G15706 NA other downstream 262806 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 1239570 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 1679650 28781472 ~ 28785507 (-)
AMCG00016712 NA other downstream 2307957 28130012 ~ 28157200 (-)
G15076 NA other downstream 3036506 27424893 ~ 27428651 (-)
G15787 NA other upstream 58488 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 912743 31380547 ~ 31388268 (-)
AMCG00016847 NA other upstream 1793745 32261549 ~ 32267968 (-)
G16247 NA other upstream 1955254 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 2029703 32497507 ~ 32507319 (-)

Expression


Co-expression Network