Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016800 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 31012563 ~ 31015970 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016800 | True | 459 | mRNA | 0.53 | 4 | 31012563 | 31015970 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016801 | psmc5,LOC107753303,LOC107745657,LOC106579096 | coding | downstream | 4137 | 31003106 ~ 31008426 (-) |
| AMCG00016793 | NA | coding | downstream | 448969 | 30558256 ~ 30563594 (-) |
| AMCG00016792 | NA | coding | downstream | 454771 | 30551128 ~ 30557792 (-) |
| AMCG00016794 | NA | coding | downstream | 544759 | 30465157 ~ 30467804 (-) |
| AMCG00016780 | NA | coding | downstream | 770994 | 30236974 ~ 30241569 (-) |
| AMCG00016802 | LOC105013322 | coding | upstream | 44381 | 31060351 ~ 31060686 (-) |
| AMCG00016807 | becn1,LOC102786760 | coding | upstream | 161586 | 31177556 ~ 31183301 (-) |
| AMCG00016812 | NA | coding | upstream | 276312 | 31292282 ~ 31315388 (-) |
| AMCG00016811 | NA | coding | upstream | 320475 | 31336445 ~ 31337280 (-) |
| AMCG00016816 | NA | coding | upstream | 384847 | 31400817 ~ 31403944 (-) |
| G15845 | NA | non-coding | downstream | 10435 | 30998634 ~ 31002128 (-) |
| G15746 | NA | non-coding | downstream | 580565 | 30429929 ~ 30431998 (-) |
| G15716 | NA | non-coding | downstream | 775696 | 30233548 ~ 30236867 (-) |
| G15711 | NA | non-coding | downstream | 804026 | 30207687 ~ 30208537 (-) |
| G15708 | NA | non-coding | downstream | 807448 | 30204822 ~ 30205115 (-) |
| G15854 | NA | non-coding | upstream | 17100 | 31033070 ~ 31033320 (-) |
| G15864 | NA | non-coding | upstream | 87409 | 31103379 ~ 31106792 (-) |
| G15890 | NA | non-coding | upstream | 156215 | 31172185 ~ 31176602 (-) |
| G15927 | NA | non-coding | upstream | 354110 | 31370080 ~ 31379449 (-) |
| G15947 | phb,LOC107661032 | non-coding | upstream | 404774 | 31420744 ~ 31421968 (-) |
| G15787 | NA | other | downstream | 483063 | 30526292 ~ 30529500 (-) |
| G15706 | NA | other | downstream | 810212 | 30201459 ~ 30202351 (-) |
| AMCG00016740 | ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 | other | downstream | 1786976 | 29201872 ~ 29225587 (-) |
| AMCG00016732 | NA | other | downstream | 2227056 | 28781472 ~ 28785507 (-) |
| AMCG00016712 | NA | other | downstream | 2855363 | 28130012 ~ 28157200 (-) |
| AMCG00016815 | NA | other | upstream | 364577 | 31380547 ~ 31388268 (-) |
| AMCG00016847 | NA | other | upstream | 1245579 | 32261549 ~ 32267968 (-) |
| G16247 | NA | other | upstream | 1407088 | 32423058 ~ 32423438 (-) |
| AMCG00016859 | NA | other | upstream | 1481537 | 32497507 ~ 32507319 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | upstream | 2160106 | 33176076 ~ 33178883 (-) |
