Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016811 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 31336445 ~ 31337280 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04142 | Lysosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016811 | True | 264 | mRNA | 0.53 | 2 | 31336445 | 31337280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016812 | NA | coding | downstream | 21057 | 31292282 ~ 31315388 (-) |
| AMCG00016807 | becn1,LOC102786760 | coding | downstream | 153144 | 31177556 ~ 31183301 (-) |
| AMCG00016802 | LOC105013322 | coding | downstream | 275759 | 31060351 ~ 31060686 (-) |
| AMCG00016800 | NA | coding | downstream | 320475 | 31012563 ~ 31015970 (-) |
| AMCG00016801 | psmc5,LOC107753303,LOC107745657,LOC106579096 | coding | downstream | 328019 | 31003106 ~ 31008426 (-) |
| AMCG00016816 | NA | coding | upstream | 63537 | 31400817 ~ 31403944 (-) |
| AMCG00016823 | nmt1,LOC102778525 | coding | upstream | 306576 | 31643856 ~ 31653933 (-) |
| AMCG00016824 | NA | coding | upstream | 320968 | 31658248 ~ 31674496 (-) |
| AMCG00016831 | NA | coding | upstream | 418255 | 31755535 ~ 31762700 (-) |
| AMCG00016833 | NA | coding | upstream | 440132 | 31777412 ~ 31801252 (-) |
| G15890 | NA | non-coding | downstream | 159843 | 31172185 ~ 31176602 (-) |
| G15864 | NA | non-coding | downstream | 229653 | 31103379 ~ 31106792 (-) |
| G15854 | NA | non-coding | downstream | 303125 | 31033070 ~ 31033320 (-) |
| G15845 | NA | non-coding | downstream | 334317 | 30998634 ~ 31002128 (-) |
| G15746 | NA | non-coding | downstream | 904447 | 30429929 ~ 30431998 (-) |
| G15927 | NA | non-coding | upstream | 32800 | 31370080 ~ 31379449 (-) |
| G15947 | phb,LOC107661032 | non-coding | upstream | 83464 | 31420744 ~ 31421968 (-) |
| G15962 | NA | non-coding | upstream | 139563 | 31476843 ~ 31481401 (-) |
| G15976 | NA | non-coding | upstream | 151981 | 31489261 ~ 31489836 (-) |
| G15982 | NA | non-coding | upstream | 166799 | 31504079 ~ 31504548 (-) |
| G15787 | NA | other | downstream | 806945 | 30526292 ~ 30529500 (-) |
| G15706 | NA | other | downstream | 1134094 | 30201459 ~ 30202351 (-) |
| AMCG00016740 | ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 | other | downstream | 2110858 | 29201872 ~ 29225587 (-) |
| AMCG00016732 | NA | other | downstream | 2550938 | 28781472 ~ 28785507 (-) |
| AMCG00016712 | NA | other | downstream | 3179245 | 28130012 ~ 28157200 (-) |
| AMCG00016815 | NA | other | upstream | 43267 | 31380547 ~ 31388268 (-) |
| AMCG00016847 | NA | other | upstream | 924269 | 32261549 ~ 32267968 (-) |
| G16247 | NA | other | upstream | 1085778 | 32423058 ~ 32423438 (-) |
| AMCG00016859 | NA | other | upstream | 1160227 | 32497507 ~ 32507319 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | upstream | 1838796 | 33176076 ~ 33178883 (-) |
