AMCG00016814


Basic Information

Item Value
gene id AMCG00016814
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 31393171 ~ 31412053 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016814
CTGAGCTGGAGTGAGTGGGAATGAGGGGATGCGTGCCGTGCACCTGAAGATAAGATTATTTTATATCATATGCATGTGCGCAtacatatttctgtatatatgtgtatgctGCATTGGTCGTGGAGACAGTTTGTTATGCGCCACACGTCGTTTATTAGCCAAGGGTCATTGACATCTAACCCTTGGTTTGcgaaatgtgcatttaaaaccaaatcaggccaataagaatattttaattattattaatgtattaggtaattatataaattaatgtgaGATTTTCACAGCTACCCTCGTTTTTAAAAGCCACATCTGAAGCAGTTGCAATGTTTCAAACGTGAATTTACACAAAGGGTACTGCGCAGTTACACAATCAACCTGTCTTTCTGAGATTCATGTATTATAgtattctttttaatgtatatatcgACATCGTCTTTCTAGGCATCTTGGAAGCACACCATATACATCCCCATTCATACTGACAGACGGGTGTGGGTTAAATGTGCATGAACGGGTGCAAAGCCTCTGCCGAAGCCCCAGCCCAGCTCTGCAGTGAAATGACATTGCAGGATGCCCGCGACCTGCGTTGTGTCTAACTGCAGAAACACGCACAAGGACGGCGTTTCGCTATTCAGTTTTCCGAGATGCGCCCGGACGTGCAGCCTGTGGGCCCGCTTCGTGCGAGAGCTGCGGCCGGACTGGGCGGGACCCGGCACCCAGAGCCGGCTGTGCTCCGCGCACTTCACCGAGGGCGACTTCGAGCCGTCCTCCTTAACCAAGTTCAGACTGCGCTTCTCGGGCCGCTTGAGCCTTAAACCGGACAGCGTCCCGTCCGTCCACTCCCCCGCAGCGGGACCGCCTGCGAGAAGACACGGGAGACCTGCGCGGAGGAAAGGTCCGGTTTCCGCAccaGGGACCAAGGCTGGCAGGGATCAGCTCAAAGGCAGAATTGAACACATTCGGGTAAAAGTCTGCCGGCCGCAAACGGTGCCCATGAAGTGGATTATTTCCGAGGACAGGAATATGATCAGTAAATGCGAGCCCAAACCCGACGGCACCGGCGCCCGGCTGCTGCGGCTCTGCCCGGCGGAGGAAGCGGGCTCAGAGACGGGAGGCGCCCGGGATTTCCCTCCCTTCCTCGAAGAAGGACAAACGCAGACCAGTGCAGGAGAAGCTGGGTTGGATATGAGAGGGAAAAATGACAAACCTGCCTCCATGCCTGTAAAGAAACGCCGAACGTGGAGGGAGGAGAAGCGCTCTTTCCAGCAGCAGTGGGAGATGAAGTTTCTGGAACGGGCGGCAGACATTGTTGATTTCCTCCAAGACGAGATGGCGGAAAAGATCTCTCGGAGCCCTTTCTACAGCCTTTCAGTGAACGAAAGCCGGGATTGGACTGGGCACCCTCGGGTTGTAGTCGGGGTTCGATATTTGGACTATGACGTAGGCTGCTTCCAGGAACGGACCCTGTGCTTGGCCACTCTGTCCCGGAATTCTTGTGTGAAGGACGCCGTTCAAGCCGTCAAAGACCGCCTTTCTGAATGTCACCTCAGCTTAACAAATTTGTGTGGGCTGACGGTTGACGGGGCAGCTCTGTTGCAGAACAAACGCTCTGAGTTTCAGAGATGCTTTCAGGAAGGCTGTGCCCAGgaactgtttgtttttagctGTTGCACCCATCCGTGTCTCACCAACCGGGCTTCCGTGAAAACCATGAGTGACGTTGAATCTCTGATAAAAAGGGTCCTCTTTATTACATCAAGCGGCTGCCCAGATCGGTGGAAATTTGCCCAACTCTGGGAGAAGGGGGACCAATCAAACAGTGTGTTGCTGACCTGCAACCCAGTGCACTGGATCAGTATGAACGACAACGTGCAAAAGCTGTTTGAGCTCTGGGATGAGctcactgaaacactgacagaCATTTCTCCCGATCTGCTCCAGGAGTTGCTGCAGCCGCAGACTTACGGTTGCCTCCTCTTCTTGAAGGAGTTTCTGCCTAAGGTCTCCTTCTTCCATCAGAATCTTCAGGATAGCCACTTGAACATATTTGATGCCATTGAACAGGTGAGTGCTTTTAGACTGGGCATTACTCAGATAGCTCTTAACCTCGATGACTCGCCTGTTTTGACTGAGTTTGCCCAGTTCCTCAAGAGCCAAGAAGCTAGCATGTCTAAGAAGATCTGCTTGACTGCCATTCACTATCTCAAAGTCCTGTCTAAGGACCTGGAGGACCGGTACCACGAAGCTGAGTTTTTGTGCCAGTACACCACATTCGTAACTGATCCCTTCTTGATTGCATCCAGCTCGTTTATCTCGGTGGAAAGTGTCTCCAGTGCCTTCCAAAAGCGATTGGCTACTTTTTTCTTGTTAAACCTCACTGATTTCCAATACTTTCTGCAGAAAATGCGTGACGACGAAGCGATGAAGGAGTACTTCCTTCAGCCTAATATCCAGCTGGAGAAGTTCTGGAGACACCTGCACTATCTGAGAGGGCAGCTCCATGTTGAGCAGGGTGCAGTTCAGGATGACGGTCTGTCCGCGGTACACCACTGCCTCCCTCTGGACTACCACATG

Function

GO: NA

KEGG:

id description
K23210 THAP10; THAP domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016814 True 2577 mRNA 0.51 5 31393171 31412053

Neighbor

gene id symbol gene type direction distance location
AMCG00016809 NA coding upstream 22822 31363835 ~ 31370349 (+)
AMCG00016810 LOC105013316,LOC108413532,LOC106607262 coding upstream 41995 31344014 ~ 31351176 (+)
AMCG00016808 NA coding upstream 162376 31183690 ~ 31230795 (+)
AMCG00016806 NA coding upstream 216634 31142408 ~ 31176537 (+)
AMCG00016804 NA coding upstream 263576 31113727 ~ 31129595 (+)
AMCG00016813 phb,LOC107661032 coding downstream 5928 31417981 ~ 31420976 (+)
AMCG00016819 znf652,LOC108258819 coding downstream 35066 31447119 ~ 31467459 (+)
AMCG00016817 NA coding downstream 81199 31493252 ~ 31503016 (+)
AMCG00016818 eftud2,LOC102798265 coding downstream 95498 31507551 ~ 31523662 (+)
AMCG00016826 NA coding downstream 154849 31566902 ~ 31569427 (+)
G15853 NA non-coding upstream 359850 31033069 ~ 31033321 (+)
G15847 psmc5,LOC107745657,LOC107684752 non-coding upstream 386165 31005897 ~ 31007006 (+)
G15817 NA non-coding upstream 486332 30905610 ~ 30906839 (+)
G15730 NA non-coding upstream 961377 30429053 ~ 30431794 (+)
G15651 NA non-coding upstream 1177461 30213172 ~ 30215710 (+)
G15961 NA non-coding downstream 63254 31475307 ~ 31476218 (+)
G15966 NA non-coding downstream 92026 31504079 ~ 31504552 (+)
G15995 NA non-coding downstream 203167 31615220 ~ 31644515 (+)
G16037 NA non-coding downstream 342989 31755042 ~ 31755427 (+)
G16169 NA non-coding downstream 849658 32261711 ~ 32262672 (+)
G15855 LOC105013322 other upstream 332026 31059340 ~ 31061145 (+)
G15659 NA other upstream 1156330 30236454 ~ 30236841 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other upstream 1279887 30109599 ~ 30113284 (+)
AMCG00016769 NA other upstream 1285444 30022607 ~ 30107727 (+)
AMCG00016820 NA other downstream 61653 31473706 ~ 31493104 (+)
AMCG00016829 NA other downstream 289616 31701669 ~ 31731446 (+)
AMCG00016830 NA other downstream 316503 31728556 ~ 31751113 (+)
AMCG00016841 NA other downstream 839755 32251808 ~ 32260627 (+)
AMCG00016854 NA other downstream 1087003 32499056 ~ 32503372 (+)

Expression


Co-expression Network