Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016816 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 31400817 ~ 31403944 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016816 | True | 729 | mRNA | 0.51 | 3 | 31400817 | 31403944 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016811 | NA | coding | downstream | 63537 | 31336445 ~ 31337280 (-) |
| AMCG00016812 | NA | coding | downstream | 85429 | 31292282 ~ 31315388 (-) |
| AMCG00016807 | becn1,LOC102786760 | coding | downstream | 217516 | 31177556 ~ 31183301 (-) |
| AMCG00016802 | LOC105013322 | coding | downstream | 340131 | 31060351 ~ 31060686 (-) |
| AMCG00016800 | NA | coding | downstream | 384847 | 31012563 ~ 31015970 (-) |
| AMCG00016823 | nmt1,LOC102778525 | coding | upstream | 239912 | 31643856 ~ 31653933 (-) |
| AMCG00016824 | NA | coding | upstream | 254304 | 31658248 ~ 31674496 (-) |
| AMCG00016831 | NA | coding | upstream | 351591 | 31755535 ~ 31762700 (-) |
| AMCG00016833 | NA | coding | upstream | 373468 | 31777412 ~ 31801252 (-) |
| AMCG00016835 | NA | coding | upstream | 399093 | 31803037 ~ 31818127 (-) |
| G15927 | NA | non-coding | downstream | 21368 | 31370080 ~ 31379449 (-) |
| G15890 | NA | non-coding | downstream | 224215 | 31172185 ~ 31176602 (-) |
| G15864 | NA | non-coding | downstream | 294025 | 31103379 ~ 31106792 (-) |
| G15854 | NA | non-coding | downstream | 367497 | 31033070 ~ 31033320 (-) |
| G15845 | NA | non-coding | downstream | 398689 | 30998634 ~ 31002128 (-) |
| G15947 | phb,LOC107661032 | non-coding | upstream | 16800 | 31420744 ~ 31421968 (-) |
| G15962 | NA | non-coding | upstream | 72899 | 31476843 ~ 31481401 (-) |
| G15976 | NA | non-coding | upstream | 85317 | 31489261 ~ 31489836 (-) |
| G15982 | NA | non-coding | upstream | 100135 | 31504079 ~ 31504548 (-) |
| G15985 | NA | non-coding | upstream | 124106 | 31528050 ~ 31528621 (-) |
| AMCG00016815 | NA | other | downstream | 12549 | 31380547 ~ 31388268 (-) |
| G15787 | NA | other | downstream | 871317 | 30526292 ~ 30529500 (-) |
| G15706 | NA | other | downstream | 1198466 | 30201459 ~ 30202351 (-) |
| AMCG00016740 | ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 | other | downstream | 2175230 | 29201872 ~ 29225587 (-) |
| AMCG00016732 | NA | other | downstream | 2615310 | 28781472 ~ 28785507 (-) |
| AMCG00016847 | NA | other | upstream | 857605 | 32261549 ~ 32267968 (-) |
| G16247 | NA | other | upstream | 1019114 | 32423058 ~ 32423438 (-) |
| AMCG00016859 | NA | other | upstream | 1093563 | 32497507 ~ 32507319 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | upstream | 1772132 | 33176076 ~ 33178883 (-) |
| AMCG00016889 | LOC107570748,LOC106906011 | other | upstream | 1987845 | 33391789 ~ 33434651 (-) |
