AMCG00016831


Basic Information

Item Value
gene id AMCG00016831
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 31755535 ~ 31762700 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016831
TTTCGATGGAGAATGACGAATTATTCACAGGACAGGCGAGAAACTGGGTGTTCATACTTGAAGTTGTAGCGTTCACAAATCAGCGttatttgctttaattaattatccGGTAATTACGACGTCGACGGTGCTTGAATCAAgACCCCAGGAAGTGACTCAGTCAGCGGTGCCCTGGCGAGAGAGGTGTCTAGGCAGTGTGCGAGTGAGGAGAATGAGATGGACGTCACCCTGTCTGTGTCCTTCCTGAAGGAGCAGCTGAGCTCCACCATTGAGGAGGCTGTGAAAACCGCTGTGGAGACAGTGCTATGTGAGACCGCCAGGCTGCTGGGTGGCAAGTTGGCAGATTTGCAGATCGCTGTAGCTGAAAAGGATAGAGAAAACCAAAGCCTGAAATTGAAGCTAGAGGTGCCTGAAAGTGGCTTGGGAGCAGTATCTGCAGACGGTTGTTTAAACGGTACCAGCCGGACTCTGAAGTCCACTCTGAAGCCGACTCTTAAGCCGACTCTGAGTAGTGGAAATCGCAGGAAGAGGCGTTTCCAAAGTAGTCGTGTTGTCCAGGAGCCACCCAGGGAAGAGCATCCAAGTTACGATGGATTTCTCACTCCTTTCTCGCCTGATCACATCGAGCTGTCTGGGGACCCCACTGCGGCAGATTATACAGAGGGACACGATGTTGGATTGCAGGCCAACTGGGAACTGATGAGCAGGGTCTTCAAAGCTGAAGAGCATGAAGGCATCTCCCTCATAGACGAGGATGGAACCACACAGTATGCTGATAGCAGTAAAGATTACCTCCACAGCCAAGATTTAAGAATAATCTCTGTCCCCATGGAAGAGGAGGAACCTGCCGATTTCAGTCCTGCCCAGATTAAGGAAGAAGACTCTGAGAACAAGACGGTCCCCACCACAGAGGAGGCACCTGAACTGGGAGCTGATCCCAATGCAGAGGTACAATCTGGGGAGTTCAGCGAATACGGAGTGCAGAGCTTTGCTGAGCAGCTTAGGGGACGACTGGAGGCTTTGGCCCCCGAGGTCATTCGCGAGTATGAGAAAGACTCGTGTTTCTGTGAGCTGTCGAGGAGGAAGCTCATCAAAATCGCAGTGGCCTACCTTGTGGAGGAGTTTGGATTCTACCCCACCTCTGCTCAGAAGACCATGTTGGCAGAGCATATTGTCGACCTCTTCCCGGCACTAAGATTGTGTGTTCCATCGGCAGGAATTAACGGCATTGAGCACCTTTACGATCCAATATCACGAACAGGGTACATTGAAACGCGGCTGCGCAATTTCCGAAGGACCCTGGAAGCCGACAAGAAGAAGTATGTGCTGAAGCGGCGGCGGACCGAGGTGCCCCCCTCGGAGCAGAAGCCAGAGGATCACGTCCCGGAAGAAACGAGGAAGTGGATCGCCCTGATGAAGAAGACTCGCCCTCTGGCCAAGAACCTCGTCCTCATCAGGAATGGCATGGAGAGGACCTTCGGTGCCAGGAGGAGGTGGATGCTGAGCAAGAGGCCCACGGTGGACGCCGTCATCACAGAGTACCCGCGCTTCCTGGATGTGCCTTCCACGATTGACTCAGAGTTTGAAAGGCTGTTCCCGGGCAAAGGGGAGAGCTTCCTATCTAAGTGGGACACCTGTGTGTTGCCCAAAGTGCGGCACATCGCCGAGAAGGAGAAGCACCCCGAAATCGGAGTACTGCTGGAACAGTCATGCGCGGAGAAAGAAGACTTCTACACGCTGACTATGCTTAAACTGCTGATCCATCTGCTCCCACCAACTAATACTGGCAGAGCCACACAACCAACGAAATGCAGCATAAAACACGCCATACGCTACCTTGTGGAATTTGCACCAGATGGCACCAGTGTGTCCTCCCTCCTTTGTGACGCAGGAACGTCCAACGGGGCATCAAGCAGCCAGGCCAAGCCGTACATCCTGAGCCTGGGTAATCTGGACAATCCCAGCAGGCAGCTCTTCATCCTGGCTCCGGCCGAGAAGGTGGTGCTGCCCCTGCAAGAAGTCAGTCTGACCCGCGCCATTGACAAGCTCTTCAAGTTCCTGTGGGTGTTCAACCTAGGCTACCCCATGCAGCTCACCTCCCTCTACAGCTTCTTCGAGTACATCTACGGCATCGAGAAGCCCATCAGCTCCAACACTGGGAAGAGATCCAAGGTTCTAGAACTGGTGTCCCGGCTCCACATGCTGTCTTGACAAGAACCAGGTCCATTTGTCTGGTCGTATTTAAGTGGTTAACTCttaaaaggggggaaaaaagagaactTTTCTGCAAAACTGCACTCAGGACAAATATCTGTTACCTTTTTTGGGAGAAAACAAATAGGGTATTTATTACTGTAGTGTTATAagtattaattgattaattctaGAAAAGGACTAGGGGCTGTTTGTTGTTAGGTGAATTTAGGTATGTATTTAGGAATACCTGCTTGAGGTGGTACTGATTTGTCTTGTGTAGATATTCTAGTCTTGAAACATTCTACGAATATTGACctacttaaaatgtaaagatgtttCCATGAAAAATAGTACTGTAAAGGTTATTCTGAATGTtggctaatttaaatttatACTTTATATGAATTAACTTATGTCTCAACATTCTTATTAGTGTGACTGTAAAGAGACGCACAGAAAACCCAAACTGAACAATATGCGAACTGTAGGCATTTGTGAAGATCGAAGAGAGCTCTGTTTCATCATGACTTAACTAAGATTTTGGTTCAGATTTGCAGATGCTCAGTGAATGCAATGAAATTCACTAcccattatatattttcttttttcacaaattatgaaacttatgaagtgtttattttgggTTCTCAAAATGTGTGCTTTGGTCTGTgtcttctgtgtattttgtaactgttttgtttttaatctaacaTATTAATACACAGCATTAAAACTGCTGTTACCCTGAGGTCTCGGTTTCAATAATTGTGACATATTTCACAAACTTTTATACCTGCCTGTTAAATGTTCAGATCATGGATGGTAGCATAATGTTCCTACAAAAGACAgataaaactacagtaaaacCATCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016831 True 3070 mRNA 0.48 9 31755535 31762700

Neighbor

gene id symbol gene type direction distance location
AMCG00016824 NA coding downstream 81039 31658248 ~ 31674496 (-)
AMCG00016823 nmt1,LOC102778525 coding downstream 101602 31643856 ~ 31653933 (-)
AMCG00016816 NA coding downstream 351591 31400817 ~ 31403944 (-)
AMCG00016811 NA coding downstream 418255 31336445 ~ 31337280 (-)
AMCG00016812 NA coding downstream 440147 31292282 ~ 31315388 (-)
AMCG00016833 NA coding upstream 14712 31777412 ~ 31801252 (-)
AMCG00016835 NA coding upstream 40337 31803037 ~ 31818127 (-)
AMCG00016834 NA coding upstream 77131 31839831 ~ 31844052 (-)
AMCG00016838 NA coding upstream 81762 31844462 ~ 31852119 (-)
AMCG00016837 LOC106607518,LOC104946854,LOC106600796,LOC102209712,LOC101480582 coding upstream 216511 31979211 ~ 32002535 (-)
G16043 NA non-coding downstream 35499 31718900 ~ 31720036 (-)
G16026 NA non-coding downstream 56135 31699136 ~ 31699400 (-)
G16024 NA non-coding downstream 57927 31693816 ~ 31697608 (-)
G16004 NA non-coding downstream 140322 31604606 ~ 31615213 (-)
G15985 NA non-coding downstream 226914 31528050 ~ 31528621 (-)
G16069 NA non-coding upstream 7030 31769730 ~ 31771274 (-)
G16154 NA non-coding upstream 443023 32205723 ~ 32206877 (-)
G16153 NA non-coding upstream 444262 32206962 ~ 32208117 (-)
G16244 NA non-coding upstream 630442 32393142 ~ 32393380 (-)
G16245 NA non-coding upstream 653491 32416191 ~ 32416444 (-)
AMCG00016815 NA other downstream 367267 31380547 ~ 31388268 (-)
G15787 NA other downstream 1226035 30526292 ~ 30529500 (-)
G15706 NA other downstream 1553184 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 2529948 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 2970028 28781472 ~ 28785507 (-)
AMCG00016847 NA other upstream 498849 32261549 ~ 32267968 (-)
G16247 NA other upstream 660358 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 734807 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 1413376 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 1629089 33391789 ~ 33434651 (-)

Expression


Co-expression Network