Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016832 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 31700472 ~ 31701626 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0010605 | negative regulation of macromolecule metabolic process | biological_process |
| GO:0006351 | transcription, DNA-templated | biological_process |
| GO:0043086 | negative regulation of catalytic activity | biological_process |
| GO:0045859 | regulation of protein kinase activity | biological_process |
| GO:0042326 | negative regulation of phosphorylation | biological_process |
| id | description |
|---|---|
| K15189 | HEXIM1_2; protein HEXIM1/2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016832 | True | 1155 | mRNA | 0.63 | 1 | 31700472 | 31701626 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016828 | NA | coding | upstream | 5721 | 31687002 ~ 31694751 (+) |
| AMCG00016825 | NA | coding | upstream | 63427 | 31635059 ~ 31637045 (+) |
| AMCG00016821 | NA | coding | upstream | 65710 | 31611617 ~ 31634762 (+) |
| AMCG00016822 | NA | coding | upstream | 108935 | 31580142 ~ 31591537 (+) |
| AMCG00016826 | NA | coding | upstream | 131045 | 31566902 ~ 31569427 (+) |
| AMCG00016827 | tmem98 | coding | downstream | 69300 | 31770926 ~ 31777458 (+) |
| AMCG00016836 | NA | coding | downstream | 323546 | 32025172 ~ 32034991 (+) |
| AMCG00016845 | NA | coding | downstream | 373125 | 32074751 ~ 32084572 (+) |
| AMCG00016844 | NA | coding | downstream | 388408 | 32090034 ~ 32139763 (+) |
| AMCG00016842 | mpp3,LOC100693772 | coding | downstream | 470246 | 32171872 ~ 32196229 (+) |
| G15995 | NA | non-coding | upstream | 55957 | 31615220 ~ 31644515 (+) |
| G15966 | NA | non-coding | upstream | 195920 | 31504079 ~ 31504552 (+) |
| G15961 | NA | non-coding | upstream | 224254 | 31475307 ~ 31476218 (+) |
| G15853 | NA | non-coding | upstream | 667151 | 31033069 ~ 31033321 (+) |
| G15847 | psmc5,LOC107745657,LOC107684752 | non-coding | upstream | 693466 | 31005897 ~ 31007006 (+) |
| G16037 | NA | non-coding | downstream | 53416 | 31755042 ~ 31755427 (+) |
| G16169 | NA | non-coding | downstream | 560085 | 32261711 ~ 32262672 (+) |
| G16211 | NA | non-coding | downstream | 736628 | 32438254 ~ 32442585 (+) |
| G16290 | NA | non-coding | downstream | 1155925 | 32857551 ~ 32859016 (+) |
| G16323 | NA | non-coding | downstream | 1280153 | 32981779 ~ 32982330 (+) |
| AMCG00016820 | NA | other | upstream | 207368 | 31473706 ~ 31493104 (+) |
| G15855 | LOC105013322 | other | upstream | 639327 | 31059340 ~ 31061145 (+) |
| G15659 | NA | other | upstream | 1463631 | 30236454 ~ 30236841 (+) |
| AMCG00016770 | rpl27,LOC106601555,LOC107551168 | other | upstream | 1587188 | 30109599 ~ 30113284 (+) |
| AMCG00016772 | g6pc | other | upstream | 1616944 | 30072938 ~ 30083528 (+) |
| AMCG00016829 | NA | other | downstream | 43 | 31701669 ~ 31731446 (+) |
| AMCG00016830 | NA | other | downstream | 26930 | 31728556 ~ 31751113 (+) |
| AMCG00016841 | NA | other | downstream | 550182 | 32251808 ~ 32260627 (+) |
| AMCG00016854 | NA | other | downstream | 797430 | 32499056 ~ 32503372 (+) |
| G16289 | NA | other | downstream | 1154735 | 32856361 ~ 32857440 (+) |
