AMCG00016853


Basic Information

Item Value
gene id AMCG00016853
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32489913 ~ 32495747 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016853
acacacacacacacacacaaggaaaggaaagaaaagttgTCCAGTCAGCTGCAGCAGCAGACGGAACACAGGGCACCCGGCACAACATCTGTTAATCGAGAATCACCCTGTCTGTCCTCTAGTCTATTGCACATCCACCCAGCACAATTTCCTGTTATGTTTCGCTCGGCTTATTGTAAAGTTCAGGCTCTCTCTCAATGATTACCGTGGGGGGACAGTACGCCTCATTACAATGAAGAGCGCTTTCCCATTCGGCAAGATTTGCCTTACACTCCTATTTGTTTCAGCTGTCCCAGCAAGAAACAAAGagCCTACAGCGAGTTCACTGAATGCACAGAGATGTTTGCAGAATGTCTGCTCATCCCCTGGCCCAATAAGATGATTGAAGAATTATTTGTGGACTTGCACTCCACGCACTTTAAAAATTGTGACTTGAACGAGTACAACGACCCTCCTCCGGAAATAGTGGGCATTCTGACAATGACGCCCATCTGCCTGATTCCACTGATGGTCACCCTGGTTGTATGGAAAACTAAAAATGGAGATAACAGCTCATAATTCTGCCACAGGGAAGAATACAAGAGCCAGGATGCGAGTAAAACGCCTATTACATAGCAGCTTGAGACCACCCAGGCCAGTGCTACAGGCCCTTGCATATAAACttgatatttcttgtttgttaccTTATTTTGAGCAGACGGCCATAGCTAGGTTAGCATTGAAAgtagaaatagaaatgtatacGTGTACAAGATATTCCTCCGCTtcatttgtgtaatttgtaaaagaCTACAGCATTTCAAATTGCTCAAATTGCTGGGTATCGTGCTGTCAAAGCTGTAGGGTTAGTTTCACAGACTTAGATTAGTACAATATTATTCAGGGTCAGGTAGTCCAAGATTAGTGTTAATCCTGGTCTGTGAAACTAGCTGGTAAAATAGAATGTCCTACTCTGACTACAAATGGCCAGACAGCAGCAGACGAGCACCCATGCACTTATTGAAACTGGAATCAACTAAAGAATGTAACTGCTTAATAACATGTATCTAAACCTCTTTCATTGGCATCACTCTCAGAAGTCTGAATGTGCAATGTAAACCAACAAGTAGTCGCAATGCTGCAATCAAGCTTTGATTTCATATAGATCAATATCTACTATCGAGTGAAAGAGCTTGGCATGGCTGGACTTCATtgtaggtttgtttttgttttagcttttttttctgtaaaactgGGGTGGTCCCTTTGGCGTCGTAATTCCCCCAGACTTTcatacagtatattgttttcTGGCTTACATCTTAACCAcaacagacaaaacagaaaacaaaaaagttgaaaatgaTGAAAGCTAGAACAGGAGGTCGTTCCTGAAGCTGAATTGATTTGGTTATGTTGGTTTGCATTAGTCATCACCAGACCCATCTGTTAGGATCCCTTCCAGTCATCAGGCCCAGTCAATAGCCAACCAGCATTACTTCTTAGATTTAGTGTAAAAGATGGGTCATTTTATATATGACCATAATTTATGGCTTAActcaggggtgtcagactccagtcctggggggccgcagtgtctgctagTTTTTATTCCAATAGGagatcccaattacttaattaaatgttatttactcaggtaggcttatctaaaacttgaatattttttttgtatagccAAAACCTTACCATTTGTTgattactcaaaacattgaacccacGGAACATTTCAGaatctggagagaagtgttaaatgtatcaagttaattgattaattagaccaattaaggtcCCTAGAGCTGGACTGGAgtgaaacccagcagacactgtggccctccaggacttGAGCCAGATACCCCTGGtttaacagattattattatcatcatataataataattattattattattattctacttGGGGGTAACATGACATATCTATTCTGTTTGAAAGGTTAGGACCAACTGGCAACCCTAGTCACAACCTGAAGAAATTTAGAGGACTGCAGGCTATTAAAATACAAGGGAAAGTCTGTACattgataaaaacattttggtttcaATTTTCAGATAAACAAACTAACCCATCATATGATTACTTTGATGATGAAAATTTGTGCAGTCCAACTAACTGGGAAGATGTTGTGCAATATATTTGCTGTGTGAGGCAATAACTTTATTACTATGAACTGGTAGTTTTTCTGTTTGATGCTCCTGCGTGCTCAAAGCAAAAGTCTGGTGTCAGCTCCTGTAAACACTTTGGCCAAGACAGCTGATACTATACCTCAAACAGAAATTACCTGCATTTATATGCAGAAAGCAAACTTGCAAGTTGTTGAGCTACTGTCAAATATTTAAGTATGggtgaaaaggaaaacaattccAGGAAAAATAAGTCTCCCAATCGTTTTCCTGGAATTGTGTTGCCCTCCATTGCTACAAATCCCAAAACTTTCATTTGCAATGTAACACTGGACGCGTGCCCTCCGAGCTCCAATGGGCATTAGACTCATGAAGAATGTGACTCtggagaaaacaagaaaacatgttaGTTAGTAACACAAATTGTGACCTCCGCTTTCTGAGGTAGTACAAAGACATAAGTCAAGCTGCTCATTaacaattcgtttttttttatgttttctgatttaaaaaaatatatatgtagttgGATGGCAAGACCTAGAGCAATAAATCTTTGGAAAGTGTTGAACGACCTATGATTGCattgttaaatttaaatatattcacctAAATGAAGAAATGTAGAGTTCTGTTGTGAAATTGTTAAGTCTTTGATTTCCagtgcactttttaaaaataatttgctagTAATACCTGGTTACTAATTATAAATCGTTATATTTGCAATTATACTCTTACATTCCAAcacttcaatgtatttttttatggcTGTTTACCTACTGACTACAGACTAGCtttagtttgtttatgtattattggGAATAAATTTTATATTAACCTCA

Function

GO: NA

KEGG:

id description
K08448 RAMP2; receptor activity modifying protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016853 True 2984 mRNA 0.39 3 32489913 32495747

Neighbor

gene id symbol gene type direction distance location
AMCG00016852 NA coding upstream 8106 32480664 ~ 32481807 (+)
AMCG00016851 NA coding upstream 55775 32393881 ~ 32434138 (+)
AMCG00016848 tubg1,LOC106601139,LOC107721485 coding upstream 186444 32284756 ~ 32303469 (+)
AMCG00016843 NA coding upstream 244378 32225792 ~ 32245535 (+)
AMCG00016840 NA coding upstream 273590 32210141 ~ 32216323 (+)
AMCG00016855 NA coding downstream 2135 32497882 ~ 32498508 (+)
AMCG00016861 NA coding downstream 95020 32590767 ~ 32607382 (+)
AMCG00016863 NA coding downstream 277328 32773075 ~ 32777472 (+)
AMCG00016865 NA coding downstream 314338 32810085 ~ 32856301 (+)
AMCG00016866 ace,LOC107598651 coding downstream 400012 32895759 ~ 32921227 (+)
G16211 NA non-coding upstream 47328 32438254 ~ 32442585 (+)
G16169 NA non-coding upstream 227241 32261711 ~ 32262672 (+)
G16037 NA non-coding upstream 734486 31755042 ~ 31755427 (+)
G15995 NA non-coding upstream 845398 31615220 ~ 31644515 (+)
G15966 NA non-coding upstream 985361 31504079 ~ 31504552 (+)
G16290 NA non-coding downstream 361804 32857551 ~ 32859016 (+)
G16323 NA non-coding downstream 486032 32981779 ~ 32982330 (+)
G16350 NA non-coding downstream 683958 33179705 ~ 33179940 (+)
G16351 NA non-coding downstream 684492 33180239 ~ 33180439 (+)
G16395 NA non-coding downstream 829347 33325094 ~ 33328342 (+)
AMCG00016841 NA other upstream 229286 32251808 ~ 32260627 (+)
AMCG00016830 NA other upstream 738800 31728556 ~ 31751113 (+)
AMCG00016829 NA other upstream 758467 31701669 ~ 31731446 (+)
AMCG00016820 NA other upstream 996809 31473706 ~ 31493104 (+)
G15855 LOC105013322 other upstream 1428768 31059340 ~ 31061145 (+)
AMCG00016854 NA other downstream 3309 32499056 ~ 32503372 (+)
G16289 NA other downstream 360614 32856361 ~ 32857440 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other downstream 824397 33320144 ~ 33333746 (+)
AMCG00016898 NA other downstream 1134265 33630012 ~ 33650080 (+)
AMCG00016901 NA other downstream 1172846 33668593 ~ 33674361 (+)

Expression


Co-expression Network