Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016855 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 32497882 ~ 32498508 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| id | description |
|---|---|
| ko00680 | Methane metabolism |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016855 | True | 627 | mRNA | 0.61 | 1 | 32497882 | 32498508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016853 | NA | coding | upstream | 2135 | 32489913 ~ 32495747 (+) |
| AMCG00016852 | NA | coding | upstream | 16075 | 32480664 ~ 32481807 (+) |
| AMCG00016851 | NA | coding | upstream | 63744 | 32393881 ~ 32434138 (+) |
| AMCG00016848 | tubg1,LOC106601139,LOC107721485 | coding | upstream | 194413 | 32284756 ~ 32303469 (+) |
| AMCG00016843 | NA | coding | upstream | 252347 | 32225792 ~ 32245535 (+) |
| AMCG00016861 | NA | coding | downstream | 92259 | 32590767 ~ 32607382 (+) |
| AMCG00016863 | NA | coding | downstream | 274567 | 32773075 ~ 32777472 (+) |
| AMCG00016865 | NA | coding | downstream | 311577 | 32810085 ~ 32856301 (+) |
| AMCG00016866 | ace,LOC107598651 | coding | downstream | 397251 | 32895759 ~ 32921227 (+) |
| AMCG00016872 | LOC101070426,LOC103367899,LOC104923905 | coding | downstream | 488072 | 32986580 ~ 32989958 (+) |
| G16211 | NA | non-coding | upstream | 55297 | 32438254 ~ 32442585 (+) |
| G16169 | NA | non-coding | upstream | 235210 | 32261711 ~ 32262672 (+) |
| G16037 | NA | non-coding | upstream | 742455 | 31755042 ~ 31755427 (+) |
| G15995 | NA | non-coding | upstream | 853367 | 31615220 ~ 31644515 (+) |
| G15966 | NA | non-coding | upstream | 993330 | 31504079 ~ 31504552 (+) |
| G16290 | NA | non-coding | downstream | 359043 | 32857551 ~ 32859016 (+) |
| G16323 | NA | non-coding | downstream | 483271 | 32981779 ~ 32982330 (+) |
| G16350 | NA | non-coding | downstream | 681197 | 33179705 ~ 33179940 (+) |
| G16351 | NA | non-coding | downstream | 681731 | 33180239 ~ 33180439 (+) |
| G16395 | NA | non-coding | downstream | 826586 | 33325094 ~ 33328342 (+) |
| AMCG00016841 | NA | other | upstream | 237255 | 32251808 ~ 32260627 (+) |
| AMCG00016830 | NA | other | upstream | 746769 | 31728556 ~ 31751113 (+) |
| AMCG00016829 | NA | other | upstream | 766436 | 31701669 ~ 31731446 (+) |
| AMCG00016820 | NA | other | upstream | 1004778 | 31473706 ~ 31493104 (+) |
| G15855 | LOC105013322 | other | upstream | 1436737 | 31059340 ~ 31061145 (+) |
| AMCG00016854 | NA | other | downstream | 548 | 32499056 ~ 32503372 (+) |
| G16289 | NA | other | downstream | 357853 | 32856361 ~ 32857440 (+) |
| AMCG00016880 | dcaf7,LOC100702343,LOC105030232,LOC105898766 | other | downstream | 821636 | 33320144 ~ 33333746 (+) |
| AMCG00016898 | NA | other | downstream | 1131504 | 33630012 ~ 33650080 (+) |
| AMCG00016901 | NA | other | downstream | 1170085 | 33668593 ~ 33674361 (+) |
