AMCG00016858 (wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078)


Basic Information

Item Value
gene id AMCG00016858
gene name wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32508349 ~ 32533759 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016858
ATGTCTCCAAATCCGATTGCTCAGTCCCACTTGGCTAAAAGACTTTGCGGCGAGGATCCTGCAGCTTACAGGGGAATGAAGCCCAATAGCTTCTTCAAAGTGAAGGTCCCTGAGCTGAAAGAGATCATCGAAGGGTGCATACGGATGAATAAAGATGAGAGGTACACCATCCAGGACCTGCTGGAACACTCCTTCTTCCAGGAGAACAATGGTGTCCACGTGGAGCTGGCCGAGGAAGATGACTACATCAAGTCCGGACTGAAGCTGTGGCTGCGTATGGATGACACCAAGAAGCTGCACGGAAAATACAAGGACAACAACGCTATCGAGTTCCTGTTCGAGCTCTACAAGGATGTGCCAGAGGAGGTGGTGCTCGGCTTTGTGTGCGAAGCCGACTTCAAACTGGTGGCCAAGGCAATTCGAGACCGCGTGACAGCCAtcaagagacagagggacaaaCAGCGCCGGCTAGAGGAGgagcagaagaagaggagggAGCAGgaaggaggaggtggaggaggagtgggtgaggaggaggaagtgcGAGAGCAAGAGCGGGCCCTGCTGAAGCTTGTTGGCCAGACTACGGACATCCCAGCCCAGCCCCGGAGTCCGCCGTCCCTCACGCCCACCAGCGCCGCCCCCTCCCCGGCCACCGGCTCGGCTGACTCGGGCATCAACGCCAACTTCCCCGCAGAGCCAGAGGAGCCCGAGGCAGACCAACACCAGCACTACCACATCCGCCACACCAGCTATTCCTCCGCCACCTCGAAACCTCCCCCTTCCCAGCCCTCCGCTTCCCCTCACTATGCCTCTGACGTGACGTCGGGCATGAGCGATGGGAACGAGGGTCTGTCCGTGCCGGAGAAGAACGGCAAAACCCAAGCCAAACGCACCGCCGGCAAGCTGTTCAGGAGGAGAGCACGCTCCCGTCTGCGCATCATCAGTGTCTCGGACAAAGTGGACAGAGTGGTGGAATGCCAGCTGCAGacccacaacaacaaaatggtaACATTCAAATTCGACCTGGACGGGGACAACCCGGAGGACATTGCAGCTGTCATGCCCAACCTGCACTCGTATGGACTGGCTCGCACCCACTCCTCATCTTCCTTGCCGGAGTATGGCTGTGCCAGTCCGAGCCAGGTGATGCCTTCTCCCGTCAGGAGTTCTGCGGGCAGCCCCGACTCAGGCAGGGACTTCTACATCGACTCAGACGTTCCGTCACCCAGCCGCCCCGTCCGCTCCCAGTCCTTTCACCAGACTCCAGAGTCTCCACAACTGTACCATCATGCCTACCAGACAGGAGGGATCCCGCACCCAGCATCACATACCCAGATGCCCCATATGCATCACTACCCGTCTCCGCCCTTCATGCCCAGCAGCAATTTCCCCTTCTACCCTAACTCCCCCAAGCATACCATGGCACACCCACTGTCTGCCAACAACCTCCAGAGCTTCTCCTCATCCCCCGGCTCCCCGAGTCCACACAACCCACTACAGCCGGGCCCCCACGGGGACGCCCAGAGCTCGGCGAGTGATGGCAGTCCCCTGTCTCCTCCAACACCGCAGCAGCAGCACCCAGGCCTGTGGCCCGCCCACTCCCAGCCCCTCTTCTCCCTGGCTAATGTGCTGTCCCTAGCGATGAGCGTGGCCCACTCCTTCATGCCCAACCCCAGCTCCCTACCCCAAGGCTTGGCCCCTATGGGCAGCTACCACCACCAATTGGGCCCACAGTCTGGATACCACCCCGGCTTCGCCCCCCAGCCCCAGACACATCTGCCCAGTGAGCCTCTGTACCACACTGGGATGTTCGCTGGGCACGGCGGGCAGCCCAACCCCTACCAGTTCCCCGATAACCAGGCTCAGACACAGCTGCAGCTGAGCCTGGCTGATATCCAGGAGGCCGGGTTCATGCCCATCCACACGGGCTCAGGCTACCATACCATCCCACTGCAAAACCAGCCCCCTGAGACCCCACCCATGCCACCTCCCTCTTCCCTGCCGGGGCTGCGCAGTCACCCTGGCCCTGGGAGTCCTAGTCCCCCCCCGAActcccctctcccccacccccaggcCCATACACTTCCCCCCACAGCAGACAGGACCGGGAgtcctgtccctccctccccagcACAAGCCGACATGCCGGGGTCCCCCACCACCCCAACACCAGATGGATCCCATGGCAGTGTGTCCTCATCCAGCCCCAAAACCCTGTCTCCCCTCGTGCTCTTCGAGTCCTCTGCGAACTCGGCCAAGGCCCGGCTGTCTCCTATCTGTGAAGAGCAAAAACCCACGGTGACTGTGGGCAGGTTCCAGGTGACACCCAGCAAAGAGGCACTAGAGCCCTCCACTGCCCCTGCCCCGACTGCCCCACCTGCCGCCAGCGCCCCCTCACCCCAagagagcgagacagagagCAGCACCGAGGAGCAGGCCGAGTCGGACCCCAGCCCCAGCAGCTCTCTCACTGTCTCGCTCCCACACTCCCCACCGGGCCCCGAGCACAGGGGCAGCGAGAAGGAGAGTCCGAGCGAGAgcgacagggagagggagagagaggccgGCCCTAGCCTAAccatgggagagagagaggatgaggaggaggcaaaggaggaggtgggggagagagaaagagggttGGATTGCACCCCTCTCGGTACCTCGGCAGACAGCGGGCTCTCTGTGACCGCGCAGGAGCCAGAGAGCCGGGGGGGGGACGGCAACCCTGGCAGCCCCCAGAACAGCCTGCCCATGCACGTGTGGATGCACTACTCCCACCCCTATATCAGCAGCGATGACACTGAGAGCGACGACGACGACATGTGGGAGGAGCTGCAGGTCCTGCGCGACAGACACCTGTCAGAGGTGCAGTCCCTCCAGGCCGTTCAGAAGAGGGAGATTGAGGAGCTCTATGAAAGGATGGGGAAGGTGCCCCCCCCTGGCATCGTGTCCCCTGCTGCCATGCTGTCCAGCCGCCAGAGACGCCTGTCCAAAAGTGGAGGATTCAACCCTTCCCGGAGAAACAGCCTACAGAGACTGGAAATCCTGCCTCCCACAGGGATCATGAGGAAGAACTCGTTCagtggcagcagcagcggctCCCAGGAGCGGTCTGGCAAAGGGGTGACCTTCGCTGCTGACTACAACAGAATGGTGAGCACTGGGGCTGACCGGCGCTGA

Function

symbol description
wnk4b Predicted to enable chloride channel inhibitor activity; potassium channel inhibitor activity; and protein serine/threonine kinase activity. Predicted to be involved in several processes, including protein phosphorylation; regulation of metal ion transport; and renal sodium ion absorption. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in hypertension and pseudohypoaldosteronism. Orthologous to human WNK4 (WNK lysine deficient protein kinase 4).

NR:

description
PREDICTED: serine/threonine-protein kinase WNK4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016858 True 3186 mRNA 0.62 14 32508349 32533759

Neighbor

gene id symbol gene type direction distance location
AMCG00016860 NA coding downstream 38242 32469895 ~ 32470107 (-)
AMCG00016856 NA coding downstream 38723 32438236 ~ 32469626 (-)
AMCG00016850 NA coding downstream 125154 32382683 ~ 32383195 (-)
AMCG00016849 NA coding downstream 183188 32304650 ~ 32325161 (-)
AMCG00016846 NA coding downstream 224309 32269963 ~ 32284040 (-)
AMCG00016857 wnk4,LOC108257086,LOC108429078,LOC105912834 coding upstream 11860 32545619 ~ 32546814 (-)
AMCG00016862 NA coding upstream 50260 32584019 ~ 32590534 (-)
AMCG00016864 NA coding upstream 140558 32674317 ~ 32692351 (-)
AMCG00016867 NA coding upstream 329487 32863246 ~ 32871525 (-)
AMCG00016868 NA coding upstream 387246 32921005 ~ 32922249 (-)
G16250 NA non-coding downstream 71666 32434236 ~ 32436683 (-)
G16249 NA non-coding downstream 80269 32427852 ~ 32428080 (-)
G16248 NA non-coding downstream 82393 32425716 ~ 32425956 (-)
G16245 NA non-coding downstream 91905 32416191 ~ 32416444 (-)
G16244 NA non-coding downstream 114969 32393142 ~ 32393380 (-)
G16292 NA non-coding upstream 321022 32854781 ~ 32857465 (-)
G16293 NA non-coding upstream 325482 32859241 ~ 32861597 (-)
G16325 NA non-coding upstream 450495 32984254 ~ 32984464 (-)
G16375 NA non-coding upstream 721894 33255653 ~ 33256382 (-)
G16377 NA non-coding upstream 750255 33284014 ~ 33284227 (-)
AMCG00016859 NA other downstream 1030 32497507 ~ 32507319 (-)
G16247 NA other downstream 84911 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 240381 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1120081 31380547 ~ 31388268 (-)
G15787 NA other downstream 1978849 30526292 ~ 30529500 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 642317 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 858030 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 954966 33488725 ~ 33513579 (-)
G16563 NA other upstream 1572931 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 2862233 35395992 ~ 35399030 (-)

Expression


Co-expression Network