Item | Value |
---|---|
gene id | AMCG00016859 |
gene name | NA |
gene type | misc |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030122.1 |
NCBI id | CM030122.1 |
chromosome length | 54868152 |
location | 32497507 ~ 32507319 (-) |
genome version | AmiCal1_2021_bowfin_Genome |
id | name | namespace |
---|---|---|
GO:0016310 | phosphorylation | biological_process |
id | description |
---|---|
ko00680 | Methane metabolism |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
AMCG00016859 | False | 414 | mRNA | 0.55 | 3 | 32502565 | 32507319 |
TU20188 | True | 2491 | TUCP | 0.49 | 3 | 32497507 | 32503252 |
TU20192 | False | 1355 | TUCP | 0.41 | 2 | 32497507 | 32498895 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00016860 | NA | coding | downstream | 27400 | 32469895 ~ 32470107 (-) |
AMCG00016856 | NA | coding | downstream | 27881 | 32438236 ~ 32469626 (-) |
AMCG00016850 | NA | coding | downstream | 114312 | 32382683 ~ 32383195 (-) |
AMCG00016849 | NA | coding | downstream | 172346 | 32304650 ~ 32325161 (-) |
AMCG00016846 | NA | coding | downstream | 213467 | 32269963 ~ 32284040 (-) |
AMCG00016858 | wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078 | coding | upstream | 1030 | 32508349 ~ 32533759 (-) |
AMCG00016857 | wnk4,LOC108257086,LOC108429078,LOC105912834 | coding | upstream | 38300 | 32545619 ~ 32546814 (-) |
AMCG00016862 | NA | coding | upstream | 76700 | 32584019 ~ 32590534 (-) |
AMCG00016864 | NA | coding | upstream | 166998 | 32674317 ~ 32692351 (-) |
AMCG00016867 | NA | coding | upstream | 355927 | 32863246 ~ 32871525 (-) |
G16250 | NA | non-coding | downstream | 60824 | 32434236 ~ 32436683 (-) |
G16249 | NA | non-coding | downstream | 69427 | 32427852 ~ 32428080 (-) |
G16248 | NA | non-coding | downstream | 71551 | 32425716 ~ 32425956 (-) |
G16245 | NA | non-coding | downstream | 81063 | 32416191 ~ 32416444 (-) |
G16244 | NA | non-coding | downstream | 104127 | 32393142 ~ 32393380 (-) |
G16292 | NA | non-coding | upstream | 347462 | 32854781 ~ 32857465 (-) |
G16293 | NA | non-coding | upstream | 351922 | 32859241 ~ 32861597 (-) |
G16325 | NA | non-coding | upstream | 476935 | 32984254 ~ 32984464 (-) |
G16375 | NA | non-coding | upstream | 748334 | 33255653 ~ 33256382 (-) |
G16377 | NA | non-coding | upstream | 776695 | 33284014 ~ 33284227 (-) |
G16247 | NA | other | downstream | 74069 | 32423058 ~ 32423438 (-) |
AMCG00016847 | NA | other | downstream | 229539 | 32261549 ~ 32267968 (-) |
AMCG00016815 | NA | other | downstream | 1109239 | 31380547 ~ 31388268 (-) |
G15787 | NA | other | downstream | 1968007 | 30526292 ~ 30529500 (-) |
G15706 | NA | other | downstream | 2295156 | 30201459 ~ 30202351 (-) |
G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | upstream | 668757 | 33176076 ~ 33178883 (-) |
AMCG00016889 | LOC107570748,LOC106906011 | other | upstream | 884470 | 33391789 ~ 33434651 (-) |
AMCG00016891 | limd2,LOC107674139,LOC107658411 | other | upstream | 981406 | 33488725 ~ 33513579 (-) |
G16563 | NA | other | upstream | 1599371 | 34106690 ~ 34107941 (-) |
AMCG00016938 | NA | other | upstream | 2888673 | 35395992 ~ 35399030 (-) |