AMCG00016875


Basic Information

Item Value
gene id AMCG00016875
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33035302 ~ 33109567 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016875
atggctCTAATAACTGGAAGAGCATGGCCTAAGGCATACAATGTGATGCCACGGCAGCGCCTCCTGttgAAAAAGACTGCATCTCGCTCGCATTATCCCCACCCAAGGAAGAATAGTGAGGCGCAAGCCACAGAGGACCAGAAGGACAACAAGAGACGGGAAAGACCCCTACTGGATCAGAGCTCAAACAAGAGCAGAGATCAAGTAAAGACCCAACATGAGTTTTTTAACATGTCTGGAATCCCAAAGGTCTTGGCATGTATAGACTGTACTCATATTCCAATAACACCACCAGGCATAGAGGCCTGTGATCTTTTAAAATTGCAGACTAAAAGCGGAACCCAAGGACGAACAGATTGGAATGCCTTGGCCTGGTACAATGCACTAATAGCAGGTTGCCAAATAGGAAACCACCTTTCCGATGTGGCAGTTAGCCAGAAGTGGCCCAACTCCAGCCATGGAGAGGACCCCTTCACTCCTTTCCCCCGCTTGCTTTTTATCCTAAAATTGAAATCGTCAAATGTGATTCATCATGACTTGCCACAGCAGAAGGACTGGAAACTAAATGCACGCCCATCTCAAGAGCTGCAATTCATCTCGCCCAGAGCCGTGCTGTCTGACTCGGCCTGTCCAATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016875 True 639 mRNA 0.48 10 33035302 33109567

Neighbor

gene id symbol gene type direction distance location
AMCG00016873 NA coding upstream 13432 33012918 ~ 33021870 (+)
AMCG00016872 LOC101070426,LOC103367899,LOC104923905 coding upstream 45344 32986580 ~ 32989958 (+)
AMCG00016866 ace,LOC107598651 coding upstream 114075 32895759 ~ 32921227 (+)
AMCG00016865 NA coding upstream 179001 32810085 ~ 32856301 (+)
AMCG00016863 NA coding upstream 257830 32773075 ~ 32777472 (+)
AMCG00016874 NA coding downstream 38924 33148491 ~ 33151617 (+)
AMCG00016885 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 coding downstream 66704 33176271 ~ 33177932 (+)
AMCG00016886 NA coding downstream 97905 33207472 ~ 33221284 (+)
AMCG00016881 NA coding downstream 111967 33221534 ~ 33244483 (+)
AMCG00016883 NA coding downstream 146658 33256225 ~ 33292591 (+)
G16323 NA non-coding upstream 52972 32981779 ~ 32982330 (+)
G16290 NA non-coding upstream 176286 32857551 ~ 32859016 (+)
G16211 NA non-coding upstream 592717 32438254 ~ 32442585 (+)
G16169 NA non-coding upstream 772630 32261711 ~ 32262672 (+)
G16037 NA non-coding upstream 1279875 31755042 ~ 31755427 (+)
G16350 NA non-coding downstream 70138 33179705 ~ 33179940 (+)
G16351 NA non-coding downstream 70672 33180239 ~ 33180439 (+)
G16395 NA non-coding downstream 215527 33325094 ~ 33328342 (+)
G16512 NA non-coding downstream 541514 33651081 ~ 33651289 (+)
G16542 NA non-coding downstream 883615 33993182 ~ 33995382 (+)
G16289 NA other upstream 177862 32856361 ~ 32857440 (+)
AMCG00016854 NA other upstream 531930 32499056 ~ 32503372 (+)
AMCG00016841 NA other upstream 774675 32251808 ~ 32260627 (+)
AMCG00016830 NA other upstream 1284189 31728556 ~ 31751113 (+)
AMCG00016829 NA other upstream 1303856 31701669 ~ 31731446 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other downstream 210577 33320144 ~ 33333746 (+)
AMCG00016898 NA other downstream 520445 33630012 ~ 33650080 (+)
AMCG00016901 NA other downstream 559026 33668593 ~ 33674361 (+)
G16546 NA other downstream 937804 34047371 ~ 34047720 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 983709 34093276 ~ 34099596 (+)

Expression


Co-expression Network