AMCG00016895


Basic Information

Item Value
gene id AMCG00016895
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33513627 ~ 33520074 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016895
GTCAGCGGCTGTATGGACGCGCATTTCAAATCTCCGTCATCGCGGATTCGAGCGCCGCGCGCTGGGAGGCTGCTCAAACCCGGAAATCCCGCCCCTCGCCGGAAGTGTCGTTGTTTTGGTTGTGCTGGCGGCGGCGTGGACGGCGAGTATGGACGACGTGCTAGAAGCGCTGGTTTTGCTTTTCGTCTGTTTGGTGGTTCACGCCGTGCAACAGCATCCCCTCTCTCTGGGCGCTGGCGAGGGAAAGCGGTCCAAACGATGCCAGCACTTCTTCGCCGGCCTCCACGCCCGCAGGAGGGCTCGACGGAAGGTGGGCTACTCCCTGGCGGGTGACTGTGCCTACCCTCTGAAGCCCTGGCTGCTCAGGCCGTACTCGGACCGTGAGCCGCTGAGCCCCGCACGCCAGGAGTTCAACCAGCGTGTGGGCAGGGCACACAGGGTGGCACTGGAGGCTCTCGCCAGGTTGAAGGGCCGGTGGCGCTGCCTCCTGAAACGCAATGACTGCCAGCTGTGGAGGCTCTCAAACCTGATGAAGGCCTGTTGCGTCCTGCACAACATCTGCGAGACCCACGGAGACCGCTTCTTCCCGGACTGGCTGACCATCGACAGAGGGGACTTCCCCCAGCCTGTTTGCCGACTCCAAGACCAAGCGGAAGAAGGGGTCGAGGCCCTGCGGACTGCCATCTGTGAACACATTCAGCAGGCCCCCTCTGAAGTATTCCCCGTGGTCCCACGGAGGCTCCTCATTGTTGTGCAGCCTTTTGGCGCACAAAAGGAGAACTCCGCTTGCACATTCGGCAGGGTGGGGGTGCTGCTGCTGGCCAATAGCTGA

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0006261 DNA-dependent DNA replication biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016895 True 832 mRNA 0.63 3 33513627 33520074

Neighbor

gene id symbol gene type direction distance location
AMCG00016894 NA coding downstream 34172 33474010 ~ 33479455 (-)
AMCG00016893 map3k3,LOC102777599 coding downstream 39816 33439552 ~ 33473811 (-)
AMCG00016887 kcnh6a,LOC106601567,LOC105012970,LOC108427397,LOC106527280 coding downstream 122872 33381884 ~ 33390755 (-)
AMCG00016888 NA coding downstream 165565 33333462 ~ 33348062 (-)
AMCG00016884 ccdc47,LOC107674171,LOC107658463,LOC107729550,LOC107721963 coding downstream 195045 33307741 ~ 33318582 (-)
AMCG00016892 ddx42 coding upstream 34027 33554101 ~ 33575296 (-)
AMCG00016904 LOC107583088 coding upstream 62650 33582724 ~ 33596242 (-)
AMCG00016907 nxph3,LOC105012985,LOC105898539,LOC107092790,LOC106601594 coding upstream 357029 33877103 ~ 33880678 (-)
AMCG00016908 NA coding upstream 480523 34000597 ~ 34008800 (-)
AMCG00016911 LOC105028465,LOC108426558,LOC107655803,LOC107557242 coding upstream 694825 34214899 ~ 34263010 (-)
G16422 NA non-coding downstream 185286 33325086 ~ 33328341 (-)
G16378 NA non-coding downstream 221378 33292031 ~ 33292249 (-)
G16377 NA non-coding downstream 229400 33284014 ~ 33284227 (-)
G16375 NA non-coding downstream 257245 33255653 ~ 33256382 (-)
G16325 NA non-coding downstream 529163 32984254 ~ 32984464 (-)
G16502 NA non-coding upstream 108026 33628100 ~ 33628919 (-)
G16505 NA non-coding upstream 114053 33634127 ~ 33634339 (-)
G16509 NA non-coding upstream 121124 33641198 ~ 33641979 (-)
G16510 NA non-coding upstream 122904 33642978 ~ 33643661 (-)
G16511 NA non-coding upstream 124135 33644209 ~ 33648440 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 48 33488725 ~ 33513579 (-)
AMCG00016889 LOC107570748,LOC106906011 other downstream 78976 33391789 ~ 33434651 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other downstream 334744 33176076 ~ 33178883 (-)
AMCG00016859 NA other downstream 1006308 32497507 ~ 32507319 (-)
G16247 NA other downstream 1090189 32423058 ~ 32423438 (-)
G16563 NA other upstream 586616 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 1875918 35395992 ~ 35399030 (-)
G17032 NA other upstream 4238083 37758157 ~ 37758471 (-)
AMCG00016959 NA other upstream 4355176 37875250 ~ 38058939 (-)
G17421 NA other upstream 7696577 41216651 ~ 41217231 (-)

Expression


Co-expression Network