AMCG00016902


Basic Information

Item Value
gene id AMCG00016902
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33625976 ~ 33628289 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016902
ATGGTCATCATGCTGCCCAGTTTGAGCATATGCTTCCTGCTCCAGCTGCTTGATCGATGCCGCTTTCGCCAATCACGCTCCAGTAGTAGTTTCCAGAAGCCAATCGGAGCACAGGAAGGGCTCCGACTCCGCCCACTACAATTAAACGGGAACAGGAGCATGTCGCTGTTGTCAGTTTGTCAAGAAGAAGGTCGGGCATCAACAGGAGGCGAGCGGAACCGAGCCGAGCGCTCCCACATAATGGCGAGCGCTTCAGTCGACTCCTACTTCTTCTGGGAAAGTGGCCGAGCTGGGTGTACAGTGGCCGACGTGTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016902 True 318 mRNA 0.55 2 33625976 33628289

Neighbor

gene id symbol gene type direction distance location
AMCG00016896 NA coding upstream 1441 33619292 ~ 33624535 (+)
AMCG00016899 NA coding upstream 8492 33597162 ~ 33617484 (+)
AMCG00016903 NA coding upstream 28864 33580309 ~ 33597112 (+)
AMCG00016900 strada coding upstream 45871 33569412 ~ 33580105 (+)
AMCG00016890 NA coding upstream 77332 33523888 ~ 33548644 (+)
AMCG00016897 s35b1,slc35b1,LOC106601597,LOC107590797 coding downstream 24628 33652917 ~ 33662307 (+)
AMCG00016906 spop,LOC107754841 coding downstream 133129 33761418 ~ 33773533 (+)
AMCG00016905 spop coding downstream 162998 33791287 ~ 33801810 (+)
AMCG00016910 NA coding downstream 541199 34169488 ~ 34191749 (+)
AMCG00016913 ptrf,LOC103029568,LOC105905374,LOC105028466,LOC107742253,LOC107664665,LOC103381660 coding downstream 640709 34268998 ~ 34271418 (+)
G16395 NA non-coding upstream 297634 33325094 ~ 33328342 (+)
G16351 NA non-coding upstream 445537 33180239 ~ 33180439 (+)
G16350 NA non-coding upstream 446036 33179705 ~ 33179940 (+)
G16323 NA non-coding upstream 643646 32981779 ~ 32982330 (+)
G16290 NA non-coding upstream 766960 32857551 ~ 32859016 (+)
G16512 NA non-coding downstream 22792 33651081 ~ 33651289 (+)
G16542 NA non-coding downstream 364893 33993182 ~ 33995382 (+)
G16552 NA non-coding downstream 476167 34104456 ~ 34105687 (+)
G16646 NA non-coding downstream 969533 34597822 ~ 34599917 (+)
G16668 NA non-coding downstream 1108048 34736337 ~ 34736549 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other upstream 292230 33320144 ~ 33333746 (+)
G16289 NA other upstream 768536 32856361 ~ 32857440 (+)
AMCG00016854 NA other upstream 1122604 32499056 ~ 32503372 (+)
AMCG00016841 NA other upstream 1365349 32251808 ~ 32260627 (+)
AMCG00016830 NA other upstream 1874863 31728556 ~ 31751113 (+)
AMCG00016898 NA other downstream 1723 33630012 ~ 33650080 (+)
AMCG00016901 NA other downstream 40304 33668593 ~ 33674361 (+)
G16546 NA other downstream 419082 34047371 ~ 34047720 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 464987 34093276 ~ 34099596 (+)
G16550 NA other downstream 472026 34100315 ~ 34100863 (+)

Expression


Co-expression Network