AMCG00016930


Basic Information

Item Value
gene id AMCG00016930
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 35121947 ~ 35131005 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016930
CGCATTTGGATCGGGCAGAGCGCGCGGCGGCTGTGCTTTtggaaagttaaaataaatatcagcgATAAAACGAGCATAAGTCCATAATGTCGGCCAACCAGGACGACGGGGAGCAGGGACCCAAGTGCTCGTTTTCTACCTACATAGCGGAAGGCGACCAACTTTACCTCAAAGGGGAATATATCAAATCCATCGAGAGTTACACCACGGGTATGTACCAGAAAGCAGAAGCCTTGTATGCAATGGGAGACTTTGAATTTGCTTTGGTGTTTTACCATCGGGGACACAAACTGCGCCCAGAGCTCCAGGAATTCAGACTGGGCATCCAGAAAGCACAAGAGGCCATTGACAATTCTGTGGGCAGCCCTTCATCTGTGAAGCTGGAAAATAAAGGAGACCTCTCGTTCTTCCAGAGAAAGGATGAGGGCAAAAAAGGCAAATCCAAATCACCAGTCAGACCactgaagaaagagaagaaactgCAGAGTAAGAAGGAAAGTCCGAAGAGCGGGAAGACAGTGCGGCAACTACTGGGGGAGCTGTACAGCGACAAGGAGTACCTGGAGAAACTGCTCAAAGATGAAGCCCTGACTTTAGGCAACGCAGAGGGGAGCTGTAAGAAGGCCCGCCAGGTCCTGAAGGTGGTGCAGGCCTGGTCTGACGAGGACGTGCCCAACAAGATAGAGGTGTTGGGCAACCTGCACAGCTTCATCGGGAACGCCCTAATCGACATGGGGGACATGGAGGGTGCGCTGGACAGCCACAAGAAGGACTTGGACCTGGCCAGGCAGAGCAATCTTTCCGAAGCAAAATCAAGGGCGCTGGACAATATCGGACGCGTGTATGCCAGGATTGGGAAATTCCCACAAGCTATAGAAGCCTGGGAGGAGAAGATTCCTCTGACCAAGACGAGCCTGGAGAAGACGTGGCTCTTCCACGAGATCGGGCGCTGCCACCTGGAGCTGGGCCGCTACGCAGAGGGTCGGGAGTACGGCGAGCACTCGCTGGTGGCAGCCGGGGAGACGGGTGACGATGAGTGGCAGCTGAATGCCTGTGTGTTGGTGGCACAGTCTGAGGTGAAACTGGGAAACTACCAGAATGCTGTGACGCACTTCCAAAAGGCCCTGGAGAAGGCAGAGGTCCTGAAGGATGACCCAGCAAAGGAGGCCGTTAAGAAGGTGATGAGGAACACATGATATAATCAGTGAAGGAGGACATTCACCTGAATCTTACAACAGACCCAGCTGTGAATTAGAATGatgAAGAGAATGTAACAGAAGAGACAGAAGCCAGTGAAGACTGAAGAAGCACTATCCTCTGTtcccaagaaaacaaaacaaaaataataaatgaataatgtattttaaacgtgATGTCTCAAAGCATTTGCATGTTGATTCGCCTGTTTCTggtgcttttacatttttaatagatCACCCTTTGTaagctttaataaaaataaaaaaagagagttCCCTACACATGAAAAAGCATTGATTTTGCTGTGGTTTACAAGAAAGATTACTAAATCCAGTAGTAAGAGACTTGATCTAGTTAAGCTaacctatatataaataaacatatgtgCTGACAGAAATATGTGTAAAGCATTTATGAATATTGTTGATGAAAAAGGAAGTATGTataatgtgatttatattaAGGCTGTCTAGAATAAATGGGTGAAGAAATAATAGAACTATAAAATAAGACATATTCACCACTAATTATTTGTGTCTATTTTTCCTGGTAATGTATTGTCATAGTAACAGAAATTGCTAATCAGCTAcaattaactgaaatgtttctggTTTTATTCAAGTAGCTTTATTATATGGGGAAAACAACTGCACTGTGACACTAGAAAGTCTGTAGAGTCTTTTAACATAACATGGATTTCTTACCTTGGAAATTAACTAAAAATCAGCAAATCTGAACTGCCAAAACATTGGTGTGCAggtaatgcaaaataataaggTCTGGGTCAGGGTAAACCTGTACACAATAAAA

Function

GO: NA

KEGG:

id description
K24254 TTC25; tetratricopeptide repeat protein 25

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016930 True 2010 mRNA 0.45 9 35121947 35131005

Neighbor

gene id symbol gene type direction distance location
AMCG00016928 dnajc7,LOC106607285 coding upstream 5279 35097590 ~ 35116668 (+)
AMCG00016927 NA coding upstream 40699 35033815 ~ 35081248 (+)
AMCG00016926 NA coding upstream 107281 35010365 ~ 35014666 (+)
AMCG00016925 NA coding upstream 194616 34924190 ~ 34927331 (+)
AMCG00016923 NA coding upstream 348308 34761492 ~ 34773639 (+)
AMCG00016929 NA coding downstream 6544 35137549 ~ 35141789 (+)
AMCG00016932 klhl11,LOC107097235,LOC103373141 coding downstream 74875 35205880 ~ 35212613 (+)
AMCG00016933 NA coding downstream 89557 35220562 ~ 35232529 (+)
AMCG00016935 NA coding downstream 116502 35247507 ~ 35260480 (+)
AMCG00016941 NA coding downstream 422217 35553222 ~ 35555196 (+)
G16705 nkiras2,kbrs2,LOC106607286 non-coding upstream 27855 35091459 ~ 35094092 (+)
G16698 NA non-coding upstream 300534 34821197 ~ 34821413 (+)
G16692 NA non-coding upstream 344900 34775825 ~ 34777047 (+)
G16668 NA non-coding upstream 385398 34736337 ~ 34736549 (+)
G16646 NA non-coding upstream 522030 34597822 ~ 34599917 (+)
G16728 NA non-coding downstream 53330 35184335 ~ 35234875 (+)
G16731 NA non-coding downstream 109774 35240779 ~ 35241527 (+)
G16771 NA non-coding downstream 132047 35263052 ~ 35265068 (+)
G16775 NA non-coding downstream 139628 35270633 ~ 35275819 (+)
G16778 NA non-coding downstream 147824 35278829 ~ 35279068 (+)
G16550 NA other upstream 1021084 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 1022351 34093276 ~ 34099596 (+)
G16546 NA other upstream 1074227 34047371 ~ 34047720 (+)
AMCG00016901 NA other upstream 1447586 33668593 ~ 33674361 (+)
AMCG00016898 NA other upstream 1471867 33630012 ~ 33650080 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other downstream 27592 35158597 ~ 35204232 (+)
G17193 NA other downstream 3365046 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 4108068 39239073 ~ 39254490 (+)
G17697 NA other downstream 7260292 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 8995209 44126214 ~ 44137931 (+)

Expression


Co-expression Network