AMCG00016960


Basic Information

Item Value
gene id AMCG00016960
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 38085290 ~ 38087536 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016960
ATTCCTCAAAACCAAAGTGAAAGACCGAGCAACAGTTATAGGAAAGTCTTAGTTCATCTATTTTTTGCATAACTATATAACAGcatgttctttttaattgaacttaAACCCTTGCATTCTCTTGTTTCTCTGGAATGTAATttcataaattacaatgttattttacaatgttttgaaaacatcCCCCAGAgtctataaatgtgtgttgcggCAACAGCATAGTTTAAGTTAACCTTGTGGCAACATTGCCTTAGAATATTATTTGGTCAGCTGCTTTGCTTTTTCTTGAAATAAATGAGTTGCTAGCAAGTTGGGAATGTACAGCATTTGACGGTGCAGCGCCGTCGCTGAAATGACAGCAGAAAGAACATAACAGGAAGGCAAATGAAGGAAAgaatttggattttttttaattattattttcattttctaacaGACCGGTGTTAGCTTCCAAATCCGGGTTTTAGCAAAGTATAAACTGAAGCTCCTCGCACATGCAGGAGACACGCTTGAAACGCCTGAACTGTGTTGCGCATCTTGTCTGGATTTCTGGTGTCATCCTGGCCATGTGGCTTTAGCGCGGCTTTGTGCAGCTCCGGCGCCGGCGCAGTACAGGCATGTGGTTGGTTGGCGCTGAGCCCCGTCTGCGCCGCCGCCGTGTACCATCACTCGGGTATTTGCGAGTACGAGGACGGTGTGTTCAAACCAGGTGACAAGTGTTTCTGCCACGACTCGGGGTTCACCTGCAGCACACCGATGAAGTGCCAGCGTATACCGGCAGGATGCAGCTACGCATAGTGTACAGAGAACCCGGGGCAGCCATGCCGGCCTTTCGGCTGCATTGGGTGACGCGGCGCCGCTGTCTGCGCAACGTGCTCCTGGCGTAGAAGAGCTATTGCGACTGAACTGGCACAGTGTCCCTCTTGATGATTTGTGGATACTTGTCTAAATCTTGCTCTGGACTGCTGACTCAGTTCCGCAATAATGACTTCTGTACTGTGCCCAGATTTTAATGACACCTGCTCATTTCAGACACTcctattttcttcttctttaatgGAGTCAACATATATTTGCTTTAATAAGATTTACAATGGCCATAATCATCTTGGCTTGACCCTCCTAGTAGGATGGAAGAGAATAAGATAATACATCCTAATATAAATAGGCTTTCAGTGGGAGGACACTCCGTAAGCAAATATTAAACGTGCTGATTCAAAGAtgggggggacggggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016960 True 1237 mRNA 0.45 3 38085290 38087536

Neighbor

gene id symbol gene type direction distance location
AMCG00016951 LOC105894324,LOC105023857,LOC106566981,LOC103373809 coding upstream 1525309 36533936 ~ 36559981 (+)
AMCG00016950 NA coding upstream 1560659 36501049 ~ 36524631 (+)
AMCG00016949 NA coding upstream 1783397 36299372 ~ 36301893 (+)
AMCG00016947 NA coding upstream 1833075 36241389 ~ 36252215 (+)
AMCG00016948 NA coding upstream 1883088 36102366 ~ 36202202 (+)
AMCG00016966 NA coding downstream 234429 38321965 ~ 38336646 (+)
AMCG00016965 NA coding downstream 250109 38337645 ~ 38351463 (+)
AMCG00016970 NA coding downstream 308163 38395699 ~ 38399287 (+)
AMCG00016972 mcm2,LOC106583719 coding downstream 313194 38400730 ~ 38415204 (+)
AMCG00016975 NA coding downstream 361072 38448608 ~ 38454664 (+)
G17044 NA non-coding upstream 98633 37948232 ~ 37986657 (+)
G17006 plxna1 non-coding upstream 629889 37455176 ~ 37455401 (+)
G17005 plxna1 non-coding upstream 638864 37446172 ~ 37446426 (+)
G17003 NA non-coding upstream 650422 37434358 ~ 37434868 (+)
G17002 NA non-coding upstream 655894 37429153 ~ 37429396 (+)
G17073 NA non-coding downstream 2265 38089801 ~ 38117255 (+)
G17089 NA non-coding downstream 47637 38135173 ~ 38135840 (+)
G17165 NA non-coding downstream 304141 38391677 ~ 38392072 (+)
G17214 NA non-coding downstream 448525 38536061 ~ 38536333 (+)
G17221 NA non-coding downstream 537990 38625526 ~ 38626023 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 2881058 35158597 ~ 35204232 (+)
G16550 NA other upstream 3984427 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 3985694 34093276 ~ 34099596 (+)
G16546 NA other upstream 4037570 34047371 ~ 34047720 (+)
AMCG00016901 NA other upstream 4410929 33668593 ~ 33674361 (+)
G17193 NA other downstream 408515 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 1151537 39239073 ~ 39254490 (+)
G17697 NA other downstream 4303761 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 6038678 44126214 ~ 44137931 (+)
G18192 NA other downstream 6567116 44654652 ~ 44656098 (+)

Expression


Co-expression Network