Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016975 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 38448608 ~ 38454664 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016975 | True | 866 | mRNA | 0.58 | 2 | 38448608 | 38454664 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016972 | mcm2,LOC106583719 | coding | upstream | 33404 | 38400730 ~ 38415204 (+) |
| AMCG00016970 | NA | coding | upstream | 49321 | 38395699 ~ 38399287 (+) |
| AMCG00016965 | NA | coding | upstream | 97145 | 38337645 ~ 38351463 (+) |
| AMCG00016966 | NA | coding | upstream | 111962 | 38321965 ~ 38336646 (+) |
| AMCG00016960 | NA | coding | upstream | 361072 | 38085290 ~ 38087536 (+) |
| AMCG00016974 | podxl2 | coding | downstream | 13486 | 38468150 ~ 38471891 (+) |
| AMCG00016973 | NA | coding | downstream | 24668 | 38479332 ~ 38492044 (+) |
| AMCG00016971 | lsm3,LOC107562728,LOC107676354,LOC100705055 | coding | downstream | 58556 | 38513220 ~ 38524777 (+) |
| AMCG00016976 | slc6a6,LOC106566182,LOC105006920 | coding | downstream | 331686 | 38786350 ~ 38800821 (+) |
| AMCG00016981 | NA | coding | downstream | 816609 | 39271273 ~ 39294718 (+) |
| G17165 | NA | non-coding | upstream | 56536 | 38391677 ~ 38392072 (+) |
| G17089 | NA | non-coding | upstream | 312768 | 38135173 ~ 38135840 (+) |
| G17073 | NA | non-coding | upstream | 331353 | 38089801 ~ 38117255 (+) |
| G17064 | NA | non-coding | upstream | 355929 | 38062034 ~ 38092679 (+) |
| G17044 | NA | non-coding | upstream | 461951 | 37948232 ~ 37986657 (+) |
| G17214 | NA | non-coding | downstream | 81397 | 38536061 ~ 38536333 (+) |
| G17221 | NA | non-coding | downstream | 170862 | 38625526 ~ 38626023 (+) |
| G17230 | NA | non-coding | downstream | 299857 | 38754521 ~ 38805946 (+) |
| G17274 | NA | non-coding | downstream | 624751 | 39079415 ~ 39079897 (+) |
| G17361 | NA | non-coding | downstream | 1335425 | 39790089 ~ 39790567 (+) |
| AMCG00016934 | acly,aclya,LOC103369716,LOC108273769 | other | upstream | 3244376 | 35158597 ~ 35204232 (+) |
| G16550 | NA | other | upstream | 4347745 | 34100315 ~ 34100863 (+) |
| AMCG00016909 | mien1,LOC107566883,LOC107755209 | other | upstream | 4349012 | 34093276 ~ 34099596 (+) |
| G16546 | NA | other | upstream | 4400888 | 34047371 ~ 34047720 (+) |
| AMCG00016901 | NA | other | upstream | 4774247 | 33668593 ~ 33674361 (+) |
| G17193 | NA | other | downstream | 41387 | 38496051 ~ 38503632 (+) |
| AMCG00016979 | NA | other | downstream | 784409 | 39239073 ~ 39254490 (+) |
| G17697 | NA | other | downstream | 3936633 | 42391297 ~ 42397787 (+) |
| AMCG00017078 | LOC106565757 | other | downstream | 5671550 | 44126214 ~ 44137931 (+) |
| G18192 | NA | other | downstream | 6199988 | 44654652 ~ 44656098 (+) |
