AMCG00016986


Basic Information

Item Value
gene id AMCG00016986
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 39798135 ~ 39800651 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016986
ATGAAGAGGCAGGCCGAGCGGGACTCGAGTCCTGCGAGAGCAATAGCAAAGCGGATACGGGAGAGAGATCGGGACCGAGAGGGGAGTCGGAGGGAGGATGGCCCAGCTACCCCGCTTTCGGCTCTGATCTCCGAGAGCAGAAATTATCACAAGCATCAGGCCCGCAGCcggagcagagagagggagaaaccCCGGGTGAGAGAGGAGCGTGCGGTGGGTGATCTGCACCACCGTCTGCATCACCACGACCTGGGGCTCAACAGCCGCCCCCCGCTCCGGACCACCGCTGCCCTCCCCAAGAGCaaagcggcggcggcggcggacATTCTGAGCGGGGCTCGCAGCGCCGGCAGCCTGGATTACAAGACGCTGCTCATCAGCAACCTGGGCTCGCAGCTCTCGGATGAGCATGTCGAGGACGGGCTTTTCCACGAGTTTAAAAAGTTCGGGGACGTCAGCGTCAAGCTGTCCCACACGCCCGAGCTCGGACGGGTCGCTTACGTGAACTTCAGGCACCCGGACGACGCTAAGGAAGCCAGGCATGCTAAAGGCAGGTTAGTGCTGTACGATCGCCCGCTTAAAGTCGAGCCCGTTTACCCAAGAAGGCGGAGCTGCACTCCTCCAGATGTGGGATACGTGCCTGTGCATGGGAGCTACCAGTTCAGACAGAGGTCCTTGTCACCGGGGGCTAGCAACATCAGAGAGGCCAGGCCTAGGCATTATGCCGTCGATGGACTTGGGCTGAGCAGGGAACGGGAAAGAGCTCTTGATTACTATAGCATGTTAGATGAACGGGGTCGTTCTTACACATACCAAGTGCCTGAGGAGGATTTAATGCCTGAGGATGATCAGAGGGCAACAAGGAACTTGTTTATTGGCAACCTGGACCACAATGTGTCAGAGGGCGAGCTGAGGAGGGGCTTTGATAAGTATGGGATCATTGAGGAGGTGGTGATTAAGCGGCCAGCCCGGGGGCAGGGGGGCGCCTATGCTTTCCTTAAATTCCAGAACTTGGACATGGCCCACCGAGCCAAGGTGGCTATGTCAGGCCGGGTCATCGGCCGGAACCCTGTGAAAATAGGGTATGGGAAAGCCAACCCCACCACCAGGCTTTGGGTGGGCGGTCTAGGCCCCAGCACATCCTTGGCAGCCCTGGCTAGGGAGTTTGACCGCTTTGGCAGCATCCGGACCATTGACTATGTGAAGGGGGACAGCTTTGCCTATATTCAGTATGAAAGTTTGGATGCTGCACAAGCTGCTTGCGGCCAGATGCGTGGCTTCCCCCTGGGGGGACCTGAAAGGAGGCTCCGTGTTGATTTTGCTAAAGCAGAAGAGAACCGCAGCTATCCACAGCAGTACCAGCCTCCTGTGCCACTGCCAGTCCACTACGACCTGCTAACGGACGGCTATGGCAGGCACCGCAGCCTGGAGCGTGAGCTCAGGGCCCGGGACAGGACTCCCCCCCATGCTCTGTttacggagagagagagagatagggctTTCCCAGACAGAGACTGGACAAGCCCCTCTAAAAGCCTGGATCGCCGCAACAACGTGGATGGGTTTGGCAGGGGCCGTGCACGGAGCCGCAGCCGGGAAAGATGGGTGGGTGAACGGGATATGGACCGGGCCTTGAGCAAGGCCTGGGAGGAGCGGCGCAAAAGAAGGAGTCTTTCCAGTGAGCGTCTCTTTGAGGACAGAGGGAGGCCCAAAGTGCGAGCAACAGGGGCATCCCCTGACCGCAGCCCTGACAGGAGCAGCCGCAGAGCCTTGGAGGTGGGGACGGAGCCCCGTGACCGCGGCAGTGACACTCCAGATGGCAGCCGCCACTCCTCGGCTGAAGACCGACCGGCCCAGGACAGCCATGAGCCCCCCCACAACAGGAAGAAAGAGGGGGAGCCACCAGAGCACAATCACCAAACTAGCGACAGCGACCAGGAGCCCACAGCTGACGAGCCCAAAACTGATGCCAAAAAGCCAGGCAACCTTTCTGAATATGCTCAGACCCTTTCAAAAGTGTGGCACGGTGCCCTGGTGCTGAAGAACAGCTGCTTCCCCACCAACATGCACCTGTTAGAGGGCGGCTCTGGGATACTCAACGTCCTGCTGAAGGACAACACTACCGGGGGGAAAATCAGCCAGCTGAAAATTGCCCAGCGCTTGCGACTGGATCAGCCCAAACTGGATGAAGTGACGCGGCGGATTAAGCAGGGGGTACCAGATGGTTATGCAGTGCTGCTTGCCATTCAGGGCCCCCTGGACAGGGACGCACCGCCCCCCGAGCCTGGCCTGCAGAGACGCTTGCTTCGCAACTTGGTCACCTACCTCAGAAACAAGCAGGCAGCTGGAGTGATAGGACTGCCCTTAGGAGGGCCCAAGGACAGAGATTTCTCTGGGATGCTGTATGCCTTTCCTCCTTGCGACTTCTCCCAGCAGTATCTCCAAGCAGCCCTCCGAACTTTGGGCAAGCTGGAGGAAGAGCACctagttgttgttattgtcagAGActccgtttaa

Function

GO: NA

KEGG:

id description
K13190 RBM15; RNA-binding protein 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016986 True 2517 mRNA 0.59 1 39798135 39800651

Neighbor

gene id symbol gene type direction distance location
AMCG00016985 manf,LOC106583751,LOC102787989 coding upstream 572 39790933 ~ 39797563 (+)
AMCG00016984 dock3 coding upstream 9319 39669200 ~ 39788816 (+)
AMCG00016982 NA coding upstream 368846 39399757 ~ 39429289 (+)
AMCG00016983 NA coding upstream 401539 39375260 ~ 39396596 (+)
AMCG00016980 NA coding upstream 475014 39305280 ~ 39323121 (+)
AMCG00016988 NA coding downstream 465290 40265941 ~ 40280387 (+)
AMCG00016989 NA coding downstream 643279 40443930 ~ 40460889 (+)
AMCG00016995 NA coding downstream 1602106 41402757 ~ 41426060 (+)
AMCG00016994 NA coding downstream 1633041 41433692 ~ 41446610 (+)
AMCG00016998 rnf123 coding downstream 1649604 41450255 ~ 41457202 (+)
G17361 NA non-coding upstream 7568 39790089 ~ 39790567 (+)
G17274 NA non-coding upstream 718238 39079415 ~ 39079897 (+)
G17230 NA non-coding upstream 992189 38754521 ~ 38805946 (+)
G17221 NA non-coding upstream 1172112 38625526 ~ 38626023 (+)
G17214 NA non-coding upstream 1261802 38536061 ~ 38536333 (+)
G17381 NA non-coding downstream 467774 40268425 ~ 40284772 (+)
G17419 NA non-coding downstream 1415844 41216495 ~ 41216809 (+)
G17424 NA non-coding downstream 1444651 41245302 ~ 41245519 (+)
G17482 NA non-coding downstream 1801297 41601948 ~ 41605391 (+)
G17491 NA non-coding downstream 1870727 41671378 ~ 41673353 (+)
AMCG00016979 NA other upstream 543645 39239073 ~ 39254490 (+)
G17193 NA other upstream 1294503 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 4593903 35158597 ~ 35204232 (+)
G16550 NA other upstream 5697272 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 5698539 34093276 ~ 34099596 (+)
G17697 NA other downstream 2590646 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 4325563 44126214 ~ 44137931 (+)
G18192 NA other downstream 4854001 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 5148383 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 9571371 49372022 ~ 49382218 (+)

Expression


Co-expression Network