AMCG00016990 (LOC103368898)


Basic Information

Item Value
gene id AMCG00016990
gene name LOC103368898
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 40989266 ~ 40990660 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016990
GGTATCTGCATTGCACAGTCCCTAAAGATCCCACATGACCACAAGACGGCAGATTTTGATAAAATCATCAGGAACCTCCTGGACACACGCAATGCACGAGCTATCATCATCTTTGCTAACGATGAAGATATAAGGGGGATCCTCAATGCCAGTAAAAGAGCCAATCAAGTGGGTCATTTCCTGTGGATTGGATCAGACAGTTGGGGAGCCAAATACAGTCCCATTCATCAGCTTGAGGATGCTGCAGTAGGAGCTGTGACAATCCTGCCAAAAAGAGCCACCATTGAA

Function

NR:

description
PREDICTED: metabotropic glutamate receptor 7-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016990 True 288 mRNA 0.47 2 40989266 40990660

Neighbor

gene id symbol gene type direction distance location
AMCG00016992 LOC105913228,LOC107691887,LOC107701594,LOC108431596,LOC100331190,LOC107592839 coding downstream 100686 40888359 ~ 40888580 (-)
AMCG00016987 pcbp4,LOC108436686,LOC107677040,LOC107708490,LOC107567193 coding downstream 1134152 39827240 ~ 39855114 (-)
AMCG00016978 sec13,LOC107557974 coding downstream 1751367 39218824 ~ 39237899 (-)
AMCG00016977 LOC108436697 coding downstream 2095747 38822108 ~ 38893519 (-)
AMCG00016969 NA coding downstream 2475499 38506156 ~ 38513767 (-)
AMCG00016991 LOC103386478,LOC108431596,LOC103131950,LOC102219775,LOC106954144,LOC106583731 coding upstream 46692 41037352 ~ 41038674 (-)
AMCG00016993 LOC106583731,LOC105007334,LOC107661916 coding upstream 116031 41106691 ~ 41108161 (-)
AMCG00016999 NA coding upstream 537996 41528656 ~ 41530149 (-)
AMCG00017002 gmppb coding upstream 596463 41587123 ~ 41596403 (-)
AMCG00017001 ip6k1 coding upstream 614755 41605415 ~ 41609900 (-)
G17414 NA non-coding downstream 111201 40873372 ~ 40878065 (-)
G17384 NA non-coding downstream 704443 40280538 ~ 40284823 (-)
G17383 NA non-coding downstream 723005 40264597 ~ 40266261 (-)
G17364 NA non-coding downstream 1188426 39794975 ~ 39800840 (-)
G17325 NA non-coding downstream 1592411 39394493 ~ 39396855 (-)
G17423 NA non-coding upstream 254266 41244926 ~ 41245225 (-)
G17505 NA non-coding upstream 611264 41601924 ~ 41605395 (-)
G17755 NA non-coding upstream 1553700 42544360 ~ 42549418 (-)
G17754 NA non-coding upstream 1559665 42550325 ~ 42551773 (-)
G17910 NA non-coding upstream 2245145 43235805 ~ 43236036 (-)
AMCG00016959 NA other downstream 2930327 37875250 ~ 38058939 (-)
G17032 NA other downstream 3230795 37758157 ~ 37758471 (-)
AMCG00016938 NA other downstream 5590236 35395992 ~ 35399030 (-)
G16563 NA other downstream 6881325 34106690 ~ 34107941 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 7475687 33488725 ~ 33513579 (-)
G17421 NA other upstream 225991 41216651 ~ 41217231 (-)
AMCG00017014 NA other upstream 946266 41936926 ~ 41938563 (-)
G17842 NA other upstream 1818051 42808711 ~ 42864616 (-)
AMCG00017051 NA other upstream 1958331 42948991 ~ 42974433 (-)
AMCG00017061 NA other upstream 2289577 43280237 ~ 43286603 (-)

Expression


Co-expression Network