AMCG00016991 (LOC103386478,LOC108431596,LOC103131950,LOC102219775,LOC106954144,LOC106583731)


Basic Information

Item Value
gene id AMCG00016991
gene name LOC103386478,LOC108431596,LOC103131950,LOC102219775,LOC106954144,LOC106583731
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 41037352 ~ 41038674 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016991
ATGTCAGAGATCCCCCAGATCAGTTACGCTTCCACAGCCCCAGAGCTCAGCGATGACCGGCGGTACGATTTCTTCTCCCGAGTTGTTCCCCCTGACTCTTTCCAAGCACAGGCCATGGTGGACATTGTGAAGGCCATGGGGTGGAACTATGTGTCCACTGTGGCTTCGGAAGGCAGCTATGGGGAGAAAGGCGTCGAAGCTTTTACCCAGCTCTCCCGGGAAGCAGGTAGGTCAAACGGATAG

Function

NR:

description
PREDICTED: metabotropic glutamate receptor 7-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016991 True 243 mRNA 0.56 2 41037352 41038674

Neighbor

gene id symbol gene type direction distance location
AMCG00016990 LOC103368898 coding downstream 46692 40989266 ~ 40990660 (-)
AMCG00016992 LOC105913228,LOC107691887,LOC107701594,LOC108431596,LOC100331190,LOC107592839 coding downstream 148772 40888359 ~ 40888580 (-)
AMCG00016987 pcbp4,LOC108436686,LOC107677040,LOC107708490,LOC107567193 coding downstream 1182238 39827240 ~ 39855114 (-)
AMCG00016978 sec13,LOC107557974 coding downstream 1799453 39218824 ~ 39237899 (-)
AMCG00016977 LOC108436697 coding downstream 2143833 38822108 ~ 38893519 (-)
AMCG00016993 LOC106583731,LOC105007334,LOC107661916 coding upstream 68017 41106691 ~ 41108161 (-)
AMCG00016999 NA coding upstream 489982 41528656 ~ 41530149 (-)
AMCG00017002 gmppb coding upstream 548449 41587123 ~ 41596403 (-)
AMCG00017001 ip6k1 coding upstream 566741 41605415 ~ 41609900 (-)
AMCG00017004 NA coding upstream 635081 41673755 ~ 41702096 (-)
G17414 NA non-coding downstream 159287 40873372 ~ 40878065 (-)
G17384 NA non-coding downstream 752529 40280538 ~ 40284823 (-)
G17383 NA non-coding downstream 771091 40264597 ~ 40266261 (-)
G17364 NA non-coding downstream 1236512 39794975 ~ 39800840 (-)
G17325 NA non-coding downstream 1640497 39394493 ~ 39396855 (-)
G17423 NA non-coding upstream 206252 41244926 ~ 41245225 (-)
G17505 NA non-coding upstream 563250 41601924 ~ 41605395 (-)
G17755 NA non-coding upstream 1505686 42544360 ~ 42549418 (-)
G17754 NA non-coding upstream 1511651 42550325 ~ 42551773 (-)
G17910 NA non-coding upstream 2197131 43235805 ~ 43236036 (-)
AMCG00016959 NA other downstream 2978413 37875250 ~ 38058939 (-)
G17032 NA other downstream 3278881 37758157 ~ 37758471 (-)
AMCG00016938 NA other downstream 5638322 35395992 ~ 35399030 (-)
G16563 NA other downstream 6929411 34106690 ~ 34107941 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 7523773 33488725 ~ 33513579 (-)
G17421 NA other upstream 177977 41216651 ~ 41217231 (-)
AMCG00017014 NA other upstream 898252 41936926 ~ 41938563 (-)
G17842 NA other upstream 1770037 42808711 ~ 42864616 (-)
AMCG00017051 NA other upstream 1910317 42948991 ~ 42974433 (-)
AMCG00017061 NA other upstream 2241563 43280237 ~ 43286603 (-)

Expression


Co-expression Network