AMCG00016993 (LOC106583731,LOC105007334,LOC107661916)


Basic Information

Item Value
gene id AMCG00016993
gene name LOC106583731,LOC105007334,LOC107661916
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 41106691 ~ 41108161 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016993
ATGGCCAGCTTCAGCACAGCATGTAAACCCGACTTTCTATGGAGAGTGCTGTGGGTGGCAAGGGTCGTGGTGGAGTTGACGCTGTCGCAGGAGATTTATGCGCCCCATTCTATACGAATCGAGGGGGACTTGACCTTGGGTGGCCTTTTCCCCGTGCATGCCCGAGGTATCCCCGGGATGCCGTGTGGGGATATCAAAAAGGAAAACGGGATCCACAGACTGGAAGCAATGATGTATGCTTTGGACCAAATTAATAGTGACGACGAGCTCTTGCCCAATATCACCTTAGGCGCCCGGGTCCTGGATACGTGTTCCAGGGACACTTACGCATTGGAGCAGTCCCTGACTTTCGTGCAGGCTCTCATACAGAAGGACACTTCGGATGTGAGGTGTACCAACGGAGAGCCCCCCGTGTTTGTGAAGCCCGAGAAGGTGGTCGGGGTGATAGGAGCATCGGCAAGTTCGGTGTCCATCATGGTCGCGAACATTTTGCGGCTTTTTCAGTTCACATTGGGCTTCAATCTGCCAGAGACTGTCAGAGTGAACGTGCTGAACTTTTAA

Function

NR:

description
PREDICTED: metabotropic glutamate receptor 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016993 True 561 mRNA 0.53 2 41106691 41108161

Neighbor

gene id symbol gene type direction distance location
AMCG00016991 LOC103386478,LOC108431596,LOC103131950,LOC102219775,LOC106954144,LOC106583731 coding downstream 68017 41037352 ~ 41038674 (-)
AMCG00016990 LOC103368898 coding downstream 116031 40989266 ~ 40990660 (-)
AMCG00016992 LOC105913228,LOC107691887,LOC107701594,LOC108431596,LOC100331190,LOC107592839 coding downstream 218111 40888359 ~ 40888580 (-)
AMCG00016987 pcbp4,LOC108436686,LOC107677040,LOC107708490,LOC107567193 coding downstream 1251577 39827240 ~ 39855114 (-)
AMCG00016978 sec13,LOC107557974 coding downstream 1868792 39218824 ~ 39237899 (-)
AMCG00016999 NA coding upstream 420495 41528656 ~ 41530149 (-)
AMCG00017002 gmppb coding upstream 478962 41587123 ~ 41596403 (-)
AMCG00017001 ip6k1 coding upstream 497254 41605415 ~ 41609900 (-)
AMCG00017004 NA coding upstream 565594 41673755 ~ 41702096 (-)
AMCG00017007 arhgef3 coding upstream 605650 41713811 ~ 41733567 (-)
G17414 NA non-coding downstream 228626 40873372 ~ 40878065 (-)
G17384 NA non-coding downstream 821868 40280538 ~ 40284823 (-)
G17383 NA non-coding downstream 840430 40264597 ~ 40266261 (-)
G17364 NA non-coding downstream 1305851 39794975 ~ 39800840 (-)
G17325 NA non-coding downstream 1709836 39394493 ~ 39396855 (-)
G17423 NA non-coding upstream 136765 41244926 ~ 41245225 (-)
G17505 NA non-coding upstream 493763 41601924 ~ 41605395 (-)
G17755 NA non-coding upstream 1436199 42544360 ~ 42549418 (-)
G17754 NA non-coding upstream 1442164 42550325 ~ 42551773 (-)
G17910 NA non-coding upstream 2127644 43235805 ~ 43236036 (-)
AMCG00016959 NA other downstream 3047752 37875250 ~ 38058939 (-)
G17032 NA other downstream 3348220 37758157 ~ 37758471 (-)
AMCG00016938 NA other downstream 5707661 35395992 ~ 35399030 (-)
G16563 NA other downstream 6998750 34106690 ~ 34107941 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 7593112 33488725 ~ 33513579 (-)
G17421 NA other upstream 108490 41216651 ~ 41217231 (-)
AMCG00017014 NA other upstream 828765 41936926 ~ 41938563 (-)
G17842 NA other upstream 1700550 42808711 ~ 42864616 (-)
AMCG00017051 NA other upstream 1840830 42948991 ~ 42974433 (-)
AMCG00017061 NA other upstream 2172076 43280237 ~ 43286603 (-)

Expression


Co-expression Network