AMCG00016999


Basic Information

Item Value
gene id AMCG00016999
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 41528656 ~ 41530149 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016999
ATGATCCGTGGTACCCGGGGTCTGGCTGGCTCCCTCCTGCTGAGCTCGCTCCTGCTGCAGCTTACCAGGGAGGGCGTCTCAGCGGACAGTTGCCCCTCTTCCTGTCTCTGTGCCACGGACATCCTGAGCTGCGTGTTTGGGAAACTTGAGCAGGTGCCCCCTGACATACCCCAGTCAGCTGCCACTCTGGACCTTAGCTACAACCGGATTGTCCAACTGGAGGAAGGGAGCTTTTCAGGGCTGCCCCGGCTGCACACTCTGCGGCTGGCCCACAACAGGGTGTCGCGGATCTCACAGGGAGCCTTCCGCAACGCCAGCGGGCTGCGCCACCTGGATCTGTCATCCAATGAGATGCATGTTGTGGAGCAGCACTACTTCCAGGAGCTGTTGGGtctggaggagctgctgctgttcaACAACCGCATCACCCGCATGGAAAGCAAGTCTCTGTCCGGCCTCACCAACCTGAGAAAGGCCTACCTGAGCCTGAACCGCCTCACTGACTTTCCCTTCTTCTCCATCCAGGAGCACAGTCACCCTTTCCTCTCCACCCTGGACCTGTCCTCCAACCGCATGCTAAAGCTGCCCCTGGAAGACATCGCCGCCCTACCCATGTCAGTGCAGAAAGGCCTCTTCCTGCACAACAACACTCTCATCTGTGAGTGCGGCATGTACAGCATGTTCCGGCACTGGGAGAGGAGGAACTTCAGCTCCATCACTGACTTCCGGGAGGAGCACACCTGCCTGGTGTATGGGGAGCGCCGGGCGTCTGTGCGCTTTTTCCGTCACACACGCTTCTTTGAGAACTGCACCATCAGAGCGCAGGGGCTGCTGGCGGAGCCTGAAGAAAGCCTGCAGGCCTTTGCTGGGGATGCAGTGCTCATGAACTGCCACACCTCCCTGCAAGGGCGGCCGATTAACTACTGGTGGATCTCCCCCCGTCAGGAATACATCATCCCACCAGGCAACAACAGCACCCTGCGCATGTTCCCCAATGGGAGCTTGGAAATCCGGGAGGCCCAGGTGGAGGACTCGGGGGTGTATCTGTGCATGGCACAGGACCGGAGGCTGCTGCGCAATGAGACCTGGGAAGTGAACGTGACAGTTCAACTGCGGCGTTCGGAGGCTGAGTCCTTCAACACTGGCCTCACGACCCTGCTGGGCTGCGTGGTCAGCCTGGTGCTGGTGCTCATGTACCTCTACTTGACCCCCTGCCGCTGTCCCTGTCGCAAGCAGCTGCCTGCAGCCCCCAGCCCGGCCAACGAGTGCAGTGCCCAGTCCTCCATTCTCACTGCCACCCCACCTGCCACCACTGAGGGCCCCGGACGTAAAGCCAGCAACAACAAGCACGTGGTCTTCTTGGAGCCCATAAAGGAGGCGCAAAACGGACGGCTGAGGGTAGCGCTGGGGCCTGAGCACTCCAAGATGCAGCAGCTACGGGGTGAAACTGACTCCATCACCTCTGTCTTCTCCGACACCCCCATTGTGCCCTAG

Function

GO: NA

KEGG:

id description
K22529 AMIGO; amphoterin-induced protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016999 True 1494 mRNA 0.60 1 41528656 41530149

Neighbor

gene id symbol gene type direction distance location
AMCG00016993 LOC106583731,LOC105007334,LOC107661916 coding downstream 420495 41106691 ~ 41108161 (-)
AMCG00016991 LOC103386478,LOC108431596,LOC103131950,LOC102219775,LOC106954144,LOC106583731 coding downstream 489982 41037352 ~ 41038674 (-)
AMCG00016990 LOC103368898 coding downstream 537996 40989266 ~ 40990660 (-)
AMCG00016992 LOC105913228,LOC107691887,LOC107701594,LOC108431596,LOC100331190,LOC107592839 coding downstream 640076 40888359 ~ 40888580 (-)
AMCG00016987 pcbp4,LOC108436686,LOC107677040,LOC107708490,LOC107567193 coding downstream 1673542 39827240 ~ 39855114 (-)
AMCG00017002 gmppb coding upstream 56974 41587123 ~ 41596403 (-)
AMCG00017001 ip6k1 coding upstream 75266 41605415 ~ 41609900 (-)
AMCG00017004 NA coding upstream 143606 41673755 ~ 41702096 (-)
AMCG00017007 arhgef3 coding upstream 183662 41713811 ~ 41733567 (-)
AMCG00017009 NA coding upstream 203469 41733618 ~ 41749556 (-)
G17423 NA non-coding downstream 283431 41244926 ~ 41245225 (-)
G17414 NA non-coding downstream 650591 40873372 ~ 40878065 (-)
G17384 NA non-coding downstream 1243833 40280538 ~ 40284823 (-)
G17383 NA non-coding downstream 1262395 40264597 ~ 40266261 (-)
G17364 NA non-coding downstream 1727816 39794975 ~ 39800840 (-)
G17505 NA non-coding upstream 71775 41601924 ~ 41605395 (-)
G17755 NA non-coding upstream 1014211 42544360 ~ 42549418 (-)
G17754 NA non-coding upstream 1020176 42550325 ~ 42551773 (-)
G17910 NA non-coding upstream 1705656 43235805 ~ 43236036 (-)
G18015 NA non-coding upstream 2103072 43633221 ~ 43633422 (-)
G17421 NA other downstream 311425 41216651 ~ 41217231 (-)
AMCG00016959 NA other downstream 3469717 37875250 ~ 38058939 (-)
G17032 NA other downstream 3770185 37758157 ~ 37758471 (-)
AMCG00016938 NA other downstream 6129626 35395992 ~ 35399030 (-)
G16563 NA other downstream 7420715 34106690 ~ 34107941 (-)
AMCG00017014 NA other upstream 406777 41936926 ~ 41938563 (-)
G17842 NA other upstream 1278562 42808711 ~ 42864616 (-)
AMCG00017051 NA other upstream 1418842 42948991 ~ 42974433 (-)
AMCG00017061 NA other upstream 1750088 43280237 ~ 43286603 (-)
AMCG00017060 NA other upstream 1775548 43305697 ~ 43308626 (-)

Expression


Co-expression Network