AMCG00017019


Basic Information

Item Value
gene id AMCG00017019
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 42212609 ~ 42213383 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017019
GAACCAGCCTGCGGGATGAGGGAACTGCTGACCACACAGAACCAGAACTGCTACCGGGAGCTGATAGAGAAGGAAGCCTACACCCGGCTGGCATGGAAAATCAAGTACGGGAAAGACTATCCGATCAACTTCATCACTAGGAAGAAGAAAGAAGCCCCAATTCCTAAACTCCCACTCAGGAAGACTGTGCTGCCACCTGTAGTCCCAGCTCGGAAGGCTCcggaagagggggagagggagaaatcTGCAGGTCCGGGATTACGGCCCACCGGAGAGTCTCCACTGGTGATGAGGCCTGTAACCCCCCAGATCAGAGGAACTCTGTACCAGGGCTTCTCCAAGGAAGGCAAAGGGAGATGCCTCTATCTTCAGGCCCGGAATCAGAAAAACCCAGAGCAGAAGTTCGGCCACCCACTCCTGTCATCCTGGGAGTACGGCTGGAGACTAGGTGATTTTGACAAAGAAATCAAATCTCCAATCAATGGAAGGTCCGGAATAGTAAAGAACACTTTCTACGCCAGAAATGGAGTTTTTAACTTCCCTTCACCGACTGATCATTTGGGATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017019 True 567 mRNA 0.52 2 42212609 42213383

Neighbor

gene id symbol gene type direction distance location
AMCG00017021 flnb,LOC107712990,LOC107657976,LOC107680511 coding upstream 2302 42156679 ~ 42210307 (+)
AMCG00017022 flnb coding upstream 101913 42110029 ~ 42110696 (+)
AMCG00017018 NA coding upstream 112294 42094411 ~ 42100315 (+)
AMCG00017017 slmap,slmapa coding upstream 142935 42066872 ~ 42069674 (+)
AMCG00017010 NA coding upstream 255442 41953747 ~ 41957167 (+)
AMCG00017020 NA coding downstream 9385 42222768 ~ 42239287 (+)
AMCG00017031 NA coding downstream 30218 42243601 ~ 42245029 (+)
AMCG00017025 NA coding downstream 32971 42246354 ~ 42267713 (+)
AMCG00017024 pdhb,LOC107721006,LOC107745408,LOC107593072,LOC107658396,LOC107586915 coding downstream 55506 42268889 ~ 42275683 (+)
AMCG00017033 kctd6b,kctd6,LOC107570288,LOC108436290,LOC107671957 coding downstream 76363 42289746 ~ 42290831 (+)
G17580 NA non-coding upstream 233943 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 469836 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 495620 41713810 ~ 41716989 (+)
G17498 NA non-coding upstream 522410 41688010 ~ 41690199 (+)
G17491 NA non-coding upstream 539256 41671378 ~ 41673353 (+)
G17882 NA non-coding downstream 839703 43053086 ~ 43112636 (+)
G17909 NA non-coding downstream 1022437 43235820 ~ 43236036 (+)
G17969 NA non-coding downstream 1180910 43394293 ~ 43394499 (+)
G17988 NA non-coding downstream 1256687 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 1286787 43500170 ~ 43500476 (+)
AMCG00016979 NA other upstream 2958119 39239073 ~ 39254490 (+)
G17193 NA other upstream 3708977 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 7008377 35158597 ~ 35204232 (+)
G16550 NA other upstream 8111746 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 8113013 34093276 ~ 34099596 (+)
G17697 NA other downstream 177914 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 1912831 44126214 ~ 44137931 (+)
G18192 NA other downstream 2441269 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 2735651 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 7158639 49372022 ~ 49382218 (+)

Expression


Co-expression Network