AMCG00017020


Basic Information

Item Value
gene id AMCG00017020
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 42222768 ~ 42239287 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017020
GCCCATTTGTCAGGCATTTATGTCGGCAAAAAAGGGACTCGCTGTCGCTACTGTACTAACTTCCCTTTAAAGGCGCTGCAACAAAGTGATAACCCTGCTGCAAAATCGGGTTTGAATCAGCACAAGAGATCAATCAAAATGGGTTTGTTAATAATCTCTGCGTTTTAAAGACACTTCACCTTCGCCAGGGGCTCGACTGCGAAGGGGGTCGTTGTACCAACCGGAAGACGATAAAAAAAGGTGCCGTGCAGTGTCAGAGAGATGGATATGGATGTGCTGAACATGTTTGTCATCGCAGGGGGGACTTTGGCCATCCCCATCCTGGCCTTTGTTGCCTCCTTCCTCCTGTGGCCCTCGGCACTCATCAGGGTCTATTACTGGTACTGGAGACGAACCCTGGGCCTGCAAGTGCGCAATGCCGATTGCGGGGGGTATCGCTTCTGTTACTCCTACAGAGGGAAGCCTGGGACCCGGCCTTCCATTCTCATGCTGCATGGCTTCTCTGCACACAAAGACATGTGGCTTTCTGTAGCAAAGTTTCTGCCAAAGCACCTTCATCTGCTGTGTGTGGACATGCCTGGACATGAAGGCACCACCCGCACCGGTCCTGAGGACTACTCCATCGAGGGCCAGGTCAAGAGGATACACCAGTTTGTTGAATGCATCCGCTTGAATAAGAAACCCTTCCATCTGGTGGGCACCTCCATGGGTGGCAATGTGGCTGGGGTGTACGCCGCTCGCTACCCATCAGACATCAGCAGCCTCACTCTCATCTGTCCTGCAGGCCTGCAGTATCCAAATGAGAGCAAGTTTGTGAAACAGCTGCGGGACCTGGAGAGGACCAACAACATCCAGGGCATTCCGCTAATCCCGTCCACGCCCGAGGagatggaggagatgctgaagTTGTGCTCTTATGTTCGTTTCAAAATCCCTCATCAGATTCTCCAGGGATTGGTGGACGTTCGCATTCCACACAATGATTTCTACCGAGAAGTATTCATGGAGATTGTCGGAGAGAAATCAAGGCACTCCTTACaggaaaacatgcatttgatcACTGTTCCTTTACAAGTCATTTGGGGAAAACAGGATcagGTGGTTGATGTCTCTGGGGCCACAGTCCTGACTGAGGCCATCCCAGGCTGCCATGTGGACCTGCTGGAGAACTGTGGCCACTCTGTGGTGATGGAGAGGCCCAGGAAAACTGCCAAGCTCATCCTGGACTTCATCATATCCCAGCAGAATGCCAGCATGGGCAGTGACAAGAAGATCTCCTGAGAGAGCACaaagattatgattattattaatattattattattaattattgttattattattactattaggtTTTCAAATCTATGTTCTGTAAATAATTAGTACCTTTAATTTTGGATCCGGTCATCTCTCAGGGAGTCCCCTCTTTAAGTTGCAAGATACTCAGTGTACCAAAGCCCCTGAGAACATTAGGATTTTAGAAAGCAGAGGCTCAGATTTATAGCACTGTAACATGGAGCAGAAACACACAACTCTTCAGAGCTGATGGAACTGCTCATGTGCAGACAAAAAGGTTAAAAAGAAGCAAGTATCTTACCCTGGCTTGTTTTTGTGCACGTAGGCCCTACTTTGGTGCAGGCAGAGAAAGTCCTGCTCTCTTAATTGACAAGTAAGTCCTCACGctttctttatttgcttttacCTTTTAAGGCTTATAGACACTATCAAGTTTGGTTTCACATGAACAGACTGGATCTTCATTATCAGCATTCTCTCCACCCTGCATAATTCCTGGCAAGGACATTCTGGATTACAATGCCACAAACTCAGTTAGCCCAGCGGAAAAGAATATAACTTGTGGTGGTTTCAGGTCAGACTTTTGTAGTGCACTGCTGTGCTGGATCACTGAAGGATAAGGATATAATGTGATAATGATCAATTCCTACATGTCTATCATGAGCTTTAAACACAGCATTATGTTCTTGCATACACAGGGTAGTTGGCTAGGTAAATAATGGATCTCAGCAATGAAACCCATTTGATAAACTCCCCTGTAGCTAGCTTGCATGTGTTTCACGTATCTCCGAGAGCCTTGGTCATAAAGGTTATGCATTCAGAAACCCTGCCTTGGAACTGGACCCCAAGTGTAGTCCCCATTCATGGCCTTCAGCACAAAGCTAGGGACACTGAAAGTCCATTCCACTTTTTCCTTACAATGTGTGACATTTTCTCCTTTAATTGTATAGTTTGTTAATGAAggtgttttattgtaaaaacaagCCCTAACAATGAAGCACTACAGTCCTCTTCAGCATTACCTGTGcttattcagttttgttttttgctttgttattGGCTGTGAGCTGATTTAGATTAATGAGAAGCAAAGTTAAACTCTTGTGCCATGCACAAGACTTTTATTTGTGAACAGAAACAATACTGTTGTGAAATTTGTTCTCCACAAGGCTTGAAATATTTAAGCAATAACTAGGGAATGCTGGGAAACAGGAATAAAAATACAGGTGTTCCAATATCATGGTGCTTTTAATGGGAGGAAACCACTTGAGACTGGATCTTTAACtactaattaaaatgtgtccaATAAGTAAATCATTAAAGGAATGGATTCTATGAATTCTGTGCTAGTAGGATTGTGGGACGATAGTATATTGATACTGTTGGTAAATATACAGGGGTGGTGATGTAGTGTAATGCTATAGGCATCTTAAGGACTGCTGCATGCTCCAGCCTGTTCAAAGAAATAGTATCTGTTGTATGAACTTAAGAACTAGGTTGATATCTGTCTCAATCTCATTCATTCCTGATTTATAGAAGAATAAACTATTCTGAC

Function

GO: NA

KEGG:

id description
K13700 ABHD6; abhydrolase domain-containing protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017020 True 2849 mRNA 0.44 9 42222768 42239287

Neighbor

gene id symbol gene type direction distance location
AMCG00017019 NA coding upstream 9385 42212609 ~ 42213383 (+)
AMCG00017021 flnb,LOC107712990,LOC107657976,LOC107680511 coding upstream 12461 42156679 ~ 42210307 (+)
AMCG00017022 flnb coding upstream 112072 42110029 ~ 42110696 (+)
AMCG00017018 NA coding upstream 122453 42094411 ~ 42100315 (+)
AMCG00017017 slmap,slmapa coding upstream 153094 42066872 ~ 42069674 (+)
AMCG00017031 NA coding downstream 4314 42243601 ~ 42245029 (+)
AMCG00017025 NA coding downstream 7067 42246354 ~ 42267713 (+)
AMCG00017024 pdhb,LOC107721006,LOC107745408,LOC107593072,LOC107658396,LOC107586915 coding downstream 29602 42268889 ~ 42275683 (+)
AMCG00017033 kctd6b,kctd6,LOC107570288,LOC108436290,LOC107671957 coding downstream 50459 42289746 ~ 42290831 (+)
AMCG00017032 NA coding downstream 70766 42310053 ~ 42311207 (+)
G17580 NA non-coding upstream 244102 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 479995 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 505779 41713810 ~ 41716989 (+)
G17498 NA non-coding upstream 532569 41688010 ~ 41690199 (+)
G17491 NA non-coding upstream 549415 41671378 ~ 41673353 (+)
G17882 NA non-coding downstream 813799 43053086 ~ 43112636 (+)
G17909 NA non-coding downstream 996533 43235820 ~ 43236036 (+)
G17969 NA non-coding downstream 1155006 43394293 ~ 43394499 (+)
G17988 NA non-coding downstream 1230783 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 1260883 43500170 ~ 43500476 (+)
AMCG00016979 NA other upstream 2968278 39239073 ~ 39254490 (+)
G17193 NA other upstream 3719136 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 7018536 35158597 ~ 35204232 (+)
G16550 NA other upstream 8121905 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 8123172 34093276 ~ 34099596 (+)
G17697 NA other downstream 152010 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 1886927 44126214 ~ 44137931 (+)
G18192 NA other downstream 2415365 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 2709747 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 7132735 49372022 ~ 49382218 (+)

Expression


Co-expression Network