AMCG00017032


Basic Information

Item Value
gene id AMCG00017032
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 42310053 ~ 42311207 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017032
ATGAATAGTAAGGACGATACTGTGGAGAAGAAGGCAGTCCATTCTTGGTCCAGAATTGCTTCCGCTGGGCAGACCGCACTTGTGGAAGCCTTGAGAGTGTTCAGCCCCATGTCCAAGGACCTTCAGGATACTGAGACGCAGCTTGTGTCTTTTCTACAGGGACTCAAAGAAGAGGGTCATACGGCCACTGTTCTGAAGAGCAAGGACGTGTATGGTTACGAGTCTTGCACAGCAGAAATGCCATCACCGGACAAGATGTCCAGACCATTGAATATTGCCCCCAAGGTAACTAAAGTGTTAAAGCCTGTTAAGAAAAGAGGAAGGAAAACAGTcgtgaagaaaaaggaaatcaatTATGCTTTGTTAAGTGCCGCAGCTAAGATCGTATTCAAGAAGCAGCCTAAGATACTTTTGACTAACCTTTCCCAGGAGTCTCTGAAGCGAACAGTAGCAGTGCTTTCGAAGTCACCTGCTTCGAGTGCACATGCGCTGAGTTCTACCAGGACTCAGCCGTGCCTGAAATTGTCAAAAATAACAGAACCCTCAGGGAGCCATACAGCCAGACTGCAAATCCATTCAGAGTTGGGGTCACTGGGGATTTCGGTGCCCAGTTCACACCAGGCCCCAAAACCCTCAGGGATGCCAGCACAGCCTTTGGATATCCCTGGGAAAACCCCCAAGGGCCTGCCCTTGGAGAGCGTAAGAGTCAGTTCCTGCCCACTGAAAATGACCGTAGCGCTAGTGGGTGGCTCTGCACCGGTTGCATGTCAGAATGGCCGGGTGTTGAAGGAAAGCAACAACTATAAAATGGTTCCTGTCAGGATTGGTAAAACCAGCTCACCGAATGATAGACTGGGCTGGAATGACAAAGCGGCTGTCAGGGTGCTGAACTGCCAGCAGGAGCTGGATGTGCGGAAAAGGAAAAGACTGGAGGAAACTGAGGAGACAACACTGAGGAAAAGACCTAAAAATGGCTCCTGGGTGTGGAAAGGCCAGGATGACTCTGGCCTGAATGAGAACAATCTGCGGTTCAAGGTGATCAAGGTGGACGATTCAATTACGGACGAGGAAGTGAGGCGAAAAGCCCAGAAGATCTTGCGGGTGAACCTTTCCCCAGTTATTGAAATCCGACCTCTTATAGCTTATCCTGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017032 True 1155 mRNA 0.49 1 42310053 42311207

Neighbor

gene id symbol gene type direction distance location
AMCG00017033 kctd6b,kctd6,LOC107570288,LOC108436290,LOC107671957 coding upstream 19222 42289746 ~ 42290831 (+)
AMCG00017024 pdhb,LOC107721006,LOC107745408,LOC107593072,LOC107658396,LOC107586915 coding upstream 34370 42268889 ~ 42275683 (+)
AMCG00017025 NA coding upstream 42340 42246354 ~ 42267713 (+)
AMCG00017031 NA coding upstream 65024 42243601 ~ 42245029 (+)
AMCG00017020 NA coding upstream 70766 42222768 ~ 42239287 (+)
AMCG00017026 NA coding downstream 40864 42352071 ~ 42376935 (+)
AMCG00017027 NA coding downstream 116990 42428197 ~ 42459859 (+)
AMCG00017029 LOC106566459,LOC106572101 coding downstream 166544 42477751 ~ 42509628 (+)
AMCG00017028 usp19 coding downstream 204219 42515426 ~ 42551765 (+)
AMCG00017023 NA coding downstream 242012 42553219 ~ 42561656 (+)
G17580 NA non-coding upstream 331387 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 567280 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 593064 41713810 ~ 41716989 (+)
G17498 NA non-coding upstream 619854 41688010 ~ 41690199 (+)
G17491 NA non-coding upstream 636700 41671378 ~ 41673353 (+)
G17882 NA non-coding downstream 741879 43053086 ~ 43112636 (+)
G17909 NA non-coding downstream 924613 43235820 ~ 43236036 (+)
G17969 NA non-coding downstream 1083086 43394293 ~ 43394499 (+)
G17988 NA non-coding downstream 1158863 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 1188963 43500170 ~ 43500476 (+)
AMCG00016979 NA other upstream 3055563 39239073 ~ 39254490 (+)
G17193 NA other upstream 3806421 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 7105821 35158597 ~ 35204232 (+)
G16550 NA other upstream 8209190 34100315 ~ 34100863 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other upstream 8210457 34093276 ~ 34099596 (+)
G17697 NA other downstream 80090 42391297 ~ 42397787 (+)
AMCG00017078 LOC106565757 other downstream 1815007 44126214 ~ 44137931 (+)
G18192 NA other downstream 2343445 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 2637827 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 7060815 49372022 ~ 49382218 (+)

Expression


Co-expression Network