AMCG00017039


Basic Information

Item Value
gene id AMCG00017039
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 42722477 ~ 42725222 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017039
ATGCGGCGACTGCACTTCGCCTCAGACCTGCAGAGGAAATACAGCATCTTCTCCATGAACACAGAGGATCAGGACAATGCTTTCCTCATCTACAAAATAACAGCTAACCTATATGAAGAGTCCATTAATGGCAAGGAAACACTTTTTTACATCATGCCTGAGAAGGTGGGGCTGCCCTACTGGACCCACGTGTGTGCTACCTATGACTCGAGCAATGGCTCCATTCAGCTGTGGCTTGATGGGAAGGGCAGTGTAATCAAAGCAATGAAAATACCTGAACCAATCCAGGAAAAACCAATTATAATACTGGGTCAAGAGCAGGACAGCTATGGCGGTGGTTTTGATCGAGGAGGGGATAGAGAAGCGGAAGTGTCCGCAGTGCACAGCACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017039 True 393 mRNA 0.48 2 42722477 42725222

Neighbor

gene id symbol gene type direction distance location
AMCG00017038 NA coding upstream 3211 42715949 ~ 42719266 (+)
AMCG00017034 klhdc8b,LOC106572099,LOC106566462 coding upstream 58049 42649854 ~ 42664428 (+)
AMCG00017035 klhdc8b,LOC106572099 coding upstream 91806 42623989 ~ 42630671 (+)
AMCG00017037 LOC106572099,LOC106566462 coding upstream 128383 42582352 ~ 42594094 (+)
AMCG00017023 NA coding upstream 160821 42553219 ~ 42561656 (+)
AMCG00017043 NA coding downstream 33591 42758813 ~ 42793348 (+)
AMCG00017044 NA coding downstream 70976 42796198 ~ 42809702 (+)
AMCG00017046 ift122 coding downstream 95570 42820792 ~ 42844311 (+)
AMCG00017045 NA coding downstream 120483 42845705 ~ 42849666 (+)
AMCG00017042 NA coding downstream 125497 42850719 ~ 42852294 (+)
G17580 NA non-coding upstream 743811 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 979704 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 1005488 41713810 ~ 41716989 (+)
G17498 NA non-coding upstream 1032278 41688010 ~ 41690199 (+)
G17491 NA non-coding upstream 1049124 41671378 ~ 41673353 (+)
G17882 NA non-coding downstream 327864 43053086 ~ 43112636 (+)
G17909 NA non-coding downstream 510598 43235820 ~ 43236036 (+)
G17969 NA non-coding downstream 669071 43394293 ~ 43394499 (+)
G17988 NA non-coding downstream 744848 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 774948 43500170 ~ 43500476 (+)
G17697 NA other upstream 324690 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 3467987 39239073 ~ 39254490 (+)
G17193 NA other upstream 4218845 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 7518245 35158597 ~ 35204232 (+)
G16550 NA other upstream 8621614 34100315 ~ 34100863 (+)
AMCG00017078 LOC106565757 other downstream 1400992 44126214 ~ 44137931 (+)
G18192 NA other downstream 1929430 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 2223812 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 6646800 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 6677309 49402531 ~ 49403845 (+)

Expression


Co-expression Network