AMCG00017042


Basic Information

Item Value
gene id AMCG00017042
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 42850719 ~ 42852294 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017042
GGGAGGCAGTTGCTGTTTCTGGTCTGTTTAGCGTTTTTAAGGTTGTGTTAGGAAAGCAAGAACGGAGAACAGAGGAAAGAGGATGCCTCCCAAAAAGACTACTGTCGTCGCTGCCTCCGCTCCTGAGCCCGAGTCCAGTGCGTCTTcagcggaggaggaggaggaggaggaggaagatggagatgaagatgaagatgaagatgaaggagatgaaaaggaggaagaaggagagCCCGAGCCCGAGACCGCCACCGAGCCCGACACGGAGGAGACCGTGGAGAAAAAGGGCAAGCTGGCCGCGGTGCGCAAAACGACAACTCATCCGGCAACTATGGAGATGATAACCGAGGCGCTGCGCCAACTGGACACCAAGAAGGGCACCTCTGTCCAGGCCATCCGCACGTACATCCTGGAGAAGTACCCGACGGTGGACCCGGCGCGGCTGAAGCCTCTGCTGCGGAGCGCTCTGAACAAAGGCATCGAGAAGGGCACCCTGGTGCGGCCCGGCAACTCGAGTGCGACCGGGGCGCAGGGCCGATTCCGGCTGGCAGTGAAGACGGTCATTAAGAAAACCAAGGAAGCGAAACTGAAAGGCGGCGAGAACGCGGATCCAAACGTGGAGGAGGCGCCGAAAGCCGGGCCCAAGAAAGGCAAGGCCAAGGAGCCGGTGTCCGAGAAGGTGAAACCTGCTGTGAAGGTTAAGGAGAAGAAATCTGAGGAATCCAAGCCTGTTAAAAAAGCACCGGTGGAGAAAAGTAAATCAAAAGTGGCTCCAGCGAAGAGGCCAAAGGCTGCCAAGAAAGGCCTGAGTGCAGAAGAGGAGGCCGAGGTGGTGAAGGAGCCGAAGGCCCAGAAGAAAGTGGCCAAGCAGAAGCCCGCGGCGAAAGAGGCCAAGGTGGACGGGGCAGCGACTAAGCCCAAACGGGGGAGGAAAGGGGCGGTGGAGTAGCGGGTTTATTTTAGTGGACTGTTTTATGATGTGCACTTGTGAATTTGAATAAAGATTTGAACTTTACTTGTTTGGGTGAGTGAGGTGTTGCTGAGATGAGCAAGTGTGGTATTTGTGGTGGGTCTAGGTGTTTGTAATGGTGTGATGTGCACAATGCATGTGCTAGTTGGGTGTGAAGTGCTTAAGTGTGTGATGTAGCATGTGCAACCCCCCTGCACAAACCCAGCGTTCTCTATCTGAATCTGTGGgatgggactttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017042 True 1219 mRNA 0.55 5 42850719 42852294

Neighbor

gene id symbol gene type direction distance location
AMCG00017045 NA coding upstream 1053 42845705 ~ 42849666 (+)
AMCG00017046 ift122 coding upstream 6408 42820792 ~ 42844311 (+)
AMCG00017044 NA coding upstream 41017 42796198 ~ 42809702 (+)
AMCG00017043 NA coding upstream 57371 42758813 ~ 42793348 (+)
AMCG00017039 NA coding upstream 125497 42722477 ~ 42725222 (+)
AMCG00017053 NA coding downstream 243344 43095638 ~ 43097515 (+)
AMCG00017054 NA coding downstream 265924 43118218 ~ 43124403 (+)
AMCG00017056 NA coding downstream 456401 43308695 ~ 43314951 (+)
AMCG00017055 NA coding downstream 465396 43317690 ~ 43319313 (+)
AMCG00017066 NA coding downstream 513533 43365827 ~ 43369383 (+)
G17580 NA non-coding upstream 872053 41976395 ~ 41978666 (+)
G17518 NA non-coding upstream 1107946 41742350 ~ 41742773 (+)
G17514 NA non-coding upstream 1133730 41713810 ~ 41716989 (+)
G17498 NA non-coding upstream 1160520 41688010 ~ 41690199 (+)
G17491 NA non-coding upstream 1177366 41671378 ~ 41673353 (+)
G17882 NA non-coding downstream 200792 43053086 ~ 43112636 (+)
G17909 NA non-coding downstream 383526 43235820 ~ 43236036 (+)
G17969 NA non-coding downstream 541999 43394293 ~ 43394499 (+)
G17988 NA non-coding downstream 617776 43470070 ~ 43470846 (+)
G17987 LOC107575789 non-coding downstream 647876 43500170 ~ 43500476 (+)
G17697 NA other upstream 452932 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 3596229 39239073 ~ 39254490 (+)
G17193 NA other upstream 4347087 38496051 ~ 38503632 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other upstream 7646487 35158597 ~ 35204232 (+)
G16550 NA other upstream 8749856 34100315 ~ 34100863 (+)
AMCG00017078 LOC106565757 other downstream 1273920 44126214 ~ 44137931 (+)
G18192 NA other downstream 1802358 44654652 ~ 44656098 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 2096740 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 6519728 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 6550237 49402531 ~ 49403845 (+)

Expression


Co-expression Network