AMCG00017051


Basic Information

Item Value
gene id AMCG00017051
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 42948991 ~ 42974433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017051
CTGACACAGAGATAGGGTCAGGTGGCTGCAGCTGTGGAAGGGGTCTCTCCGGGAGCTAATAGcacgaggaggaggagtggtGTAGACCCGGCTAAGAGGGACACCAGCCCCTCCCTCTTCTCTTCTCGTCTCGTCTCCTCTCCTGTTCCATCcccactccccccacccccctcttccCTCCTCACCAGCAGCCAGACACCACGGCACGGCACAGTGCACAGCTGACTCACAGGAAGTCTTAACAGCCCAGCCTTGGCTTGTTTTGCGTTTGAATGTGGTGTGCTGGGACATGAGAGGAGCTGCTCCTTCCAGCAAGACGACGGAGTGACAGAGACAGGACTCtcctttctgtctttttatttttttgggggggtggcaTTATTGTCATCATGTAGCACTTCTCCTCTGCTGCAGCCCCTACCCCCCTTGTCCTTCAACCTCCCCCAACCCTGGCCCCCACCCCAAAGTCTGCTTTGGGGGGTCAAATCGGCATTTCTGAGTGAGAGTCCAAGAGACAGTGACAATGGTTCAGCGCTTCAGCCTCAGAAGGCAGCTCTCTaagcAGCTGAAAAACACTTCTGCTGAAACTGTAAATATTTCTCCACCCTCGCTGGCACCAGAGACAACAAGTAAGCGCGAGTGCGGAGTACACGGCTGCACAGTGCCGCCCCCTGTTCATGACCAACTGGGCTCAGGCCTGGGAGAAGGAaattaa
>TU22171
CCCGCCCTGGTTCTCTAAAAGGAGCCCGAGCTGGCTCTCgttctgttcctctctctctctctctctctctctctctgcctctctctctctctctctcactcactcacaccgGGCTGGCTGACACAGAGATAGGGTCAGGTGGCTGCAGCTGTGGAAGGGGTCTCTCCGGGAGCTAATAGcacgaggaggaggagtggtGTAGACCCGGCTAAGAGGGACACCAGCCCCTCCCTCTTCTCTTCTCGTCTCGTCTCCTCTCCTGTTCCATCcccactccccccacccccctcttccCTCCTCACCAGCAGCCAGACACCACGGCACGGCACAGTGCACAGCTGACTCACAGGAAGTCTTAACAGCCCAGCCTTGGCTTGTTTTGCGTTTGAATGTGGTGTGCTGGGACATGAGAGGAGCTGCTCCTTCCAGCAAGACGACGGAGTGACAGAGACAGGACTCtcctttctgtctttttatttttttgggggggtggcaTTATTGTCATCATGTAGCACTTCTCCTCTGCTGCAGCCCCTACCCCCCTTGTCCTTCAACCTCCCCCAACCCTGGCCCCCACCCCAAAGTCTGCTTTGGGGGGTCAAATCGGCATTTCTGAGTGAGAGTCCAAGAGACAGTGACAATGGTTCAGCGCTTCAGCCTCAGAAGGCAGCTCTCTaagcAGCTGAAAAACACTTCTGCTGAAACTGTAAATATTTCTCCACCCTCGCTGGCACCAGAGACAACAAGTAGGCAAAGATGGATTGGCCTGGGAACAATGTACAGCCTGTGTGCAGAACGTGGGCAGCTACGGGAGTGGAGTGCAGTGTTTCTGCTCGCAAGACGGAAATCGGACAGTCTAGAGAGCCTGGCTTTGTTTGTCCTGTCAAATGCGCAGTTTCCACTTTCACCATATCTGTGCTTACTAATCAACTAAATATTGGGCCCCCCAAAATTAAGCTCCCTTTGAATTCTCCTCACTGGTATGCATCGGAAATTGCACCTTTAGGAAATGTGAAGGTTGTTTATCTAATTAAAGCCAGCATTCCCATGTTTGTGTTGTACTAGACATTtcttatgtattaatattagaGCACACATTCTGTGCTACCAGAGAGGAAATGGCTGTTGAGCAGCAATAAAGTTAGCCTAATTTGCCTGGTTATTAGCTTCAGTTATTGTGCTGTGCTCTggatggtggtgggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017051 False 715 mRNA 0.56 5 42948991 42974316
TU22171 True 1203 lncRNA 0.52 2 42966356 42974433

Neighbor

gene id symbol gene type direction distance location
AMCG00017050 tmcc1 coding downstream 12442 42919702 ~ 42936549 (-)
AMCG00017049 plxnd1 coding downstream 43945 42856124 ~ 42905046 (-)
AMCG00017047 NA coding downstream 128251 42816400 ~ 42820740 (-)
AMCG00017048 NA coding downstream 133347 42809776 ~ 42815644 (-)
AMCG00017040 NA coding downstream 211039 42721872 ~ 42737952 (-)
AMCG00017052 NA coding upstream 26393 43000826 ~ 43001932 (-)
AMCG00017063 mrps25 coding upstream 152823 43127256 ~ 43128666 (-)
AMCG00017062 nr2c2 coding upstream 156917 43131350 ~ 43155633 (-)
AMCG00017064 NA coding upstream 181206 43155639 ~ 43270969 (-)
AMCG00017058 NA coding upstream 316892 43291325 ~ 43296289 (-)
G17754 NA non-coding downstream 397218 42550325 ~ 42551773 (-)
G17755 NA non-coding downstream 399573 42544360 ~ 42549418 (-)
G17505 NA non-coding downstream 1343596 41601924 ~ 41605395 (-)
G17423 NA non-coding downstream 1703766 41244926 ~ 41245225 (-)
G17414 NA non-coding downstream 2070926 40873372 ~ 40878065 (-)
G17910 NA non-coding upstream 261372 43235805 ~ 43236036 (-)
G18015 NA non-coding upstream 658788 43633221 ~ 43633422 (-)
G18066 NA non-coding upstream 862744 43837177 ~ 43891907 (-)
G18101 NA non-coding upstream 1161755 44136188 ~ 44138542 (-)
G18156 NA non-coding upstream 1402564 44376997 ~ 44377221 (-)
G17842 NA other downstream 84375 42808711 ~ 42864616 (-)
AMCG00017014 NA other downstream 1010428 41936926 ~ 41938563 (-)
G17421 NA other downstream 1731760 41216651 ~ 41217231 (-)
AMCG00016959 NA other downstream 4890052 37875250 ~ 38058939 (-)
G17032 NA other downstream 5190520 37758157 ~ 37758471 (-)
AMCG00017061 NA other upstream 305804 43280237 ~ 43286603 (-)
AMCG00017060 NA other upstream 331264 43305697 ~ 43308626 (-)
AMCG00017067 sumf1 other upstream 659337 43633770 ~ 43659602 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other upstream 1679022 44653455 ~ 44656905 (-)
AMCG00017105 srgap3 other upstream 2143857 45118290 ~ 45161137 (-)

Expression


Co-expression Network