Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017053 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 43095638 ~ 43097515 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005179 | hormone activity | molecular_function |
| id | description |
|---|---|
| K05253 | TRH; thyrotropin-releasing hormone |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017053 | True | 846 | mRNA | 0.57 | 2 | 43095638 | 43097515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017042 | NA | coding | upstream | 243344 | 42850719 ~ 42852294 (+) |
| AMCG00017045 | NA | coding | upstream | 245972 | 42845705 ~ 42849666 (+) |
| AMCG00017046 | ift122 | coding | upstream | 251327 | 42820792 ~ 42844311 (+) |
| AMCG00017044 | NA | coding | upstream | 285936 | 42796198 ~ 42809702 (+) |
| AMCG00017043 | NA | coding | upstream | 302290 | 42758813 ~ 42793348 (+) |
| AMCG00017054 | NA | coding | downstream | 20703 | 43118218 ~ 43124403 (+) |
| AMCG00017056 | NA | coding | downstream | 211180 | 43308695 ~ 43314951 (+) |
| AMCG00017055 | NA | coding | downstream | 220175 | 43317690 ~ 43319313 (+) |
| AMCG00017066 | NA | coding | downstream | 268312 | 43365827 ~ 43369383 (+) |
| AMCG00017065 | NA | coding | downstream | 274143 | 43371658 ~ 43384849 (+) |
| G17580 | NA | non-coding | upstream | 1116972 | 41976395 ~ 41978666 (+) |
| G17518 | NA | non-coding | upstream | 1352865 | 41742350 ~ 41742773 (+) |
| G17514 | NA | non-coding | upstream | 1378649 | 41713810 ~ 41716989 (+) |
| G17498 | NA | non-coding | upstream | 1405439 | 41688010 ~ 41690199 (+) |
| G17491 | NA | non-coding | upstream | 1422285 | 41671378 ~ 41673353 (+) |
| G17909 | NA | non-coding | downstream | 138305 | 43235820 ~ 43236036 (+) |
| G17969 | NA | non-coding | downstream | 296778 | 43394293 ~ 43394499 (+) |
| G17988 | NA | non-coding | downstream | 372555 | 43470070 ~ 43470846 (+) |
| G17987 | LOC107575789 | non-coding | downstream | 402655 | 43500170 ~ 43500476 (+) |
| G18077 | NA | non-coding | downstream | 1004511 | 44102026 ~ 44103399 (+) |
| G17697 | NA | other | upstream | 697851 | 42391297 ~ 42397787 (+) |
| AMCG00016979 | NA | other | upstream | 3841148 | 39239073 ~ 39254490 (+) |
| G17193 | NA | other | upstream | 4592006 | 38496051 ~ 38503632 (+) |
| AMCG00016934 | acly,aclya,LOC103369716,LOC108273769 | other | upstream | 7891406 | 35158597 ~ 35204232 (+) |
| G16550 | NA | other | upstream | 8994775 | 34100315 ~ 34100863 (+) |
| AMCG00017078 | LOC106565757 | other | downstream | 1028699 | 44126214 ~ 44137931 (+) |
| G18192 | NA | other | downstream | 1557137 | 44654652 ~ 44656098 (+) |
| AMCG00017099 | cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 | other | downstream | 1851519 | 44949034 ~ 44961601 (+) |
| AMCG00017167 | NA | other | downstream | 6274507 | 49372022 ~ 49382218 (+) |
| AMCG00017173 | NA | other | downstream | 6305016 | 49402531 ~ 49403845 (+) |
