Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017083 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 44445621 ~ 44453494 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017083 | True | 366 | mRNA | 0.44 | 4 | 44445621 | 44453494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017082 | NA | coding | upstream | 34282 | 44388912 ~ 44411339 (+) |
| AMCG00017081 | NA | coding | upstream | 59635 | 44372888 ~ 44385986 (+) |
| AMCG00017080 | camkv,LOC106582757 | coding | upstream | 74113 | 44364606 ~ 44371508 (+) |
| AMCG00017079 | NA | coding | upstream | 285150 | 44146712 ~ 44160471 (+) |
| AMCG00017070 | edem1,LOC102794187 | coding | upstream | 590297 | 43843414 ~ 43855324 (+) |
| AMCG00017084 | NA | coding | downstream | 14625 | 44468119 ~ 44477790 (+) |
| AMCG00017088 | LOC100694221,LOC104965620,LOC102796420,LOC101486183,LOC103385919 | coding | downstream | 203293 | 44656787 ~ 44658914 (+) |
| AMCG00017090 | LOC103399082 | coding | downstream | 239489 | 44692983 ~ 44714100 (+) |
| AMCG00017096 | NA | coding | downstream | 261897 | 44715391 ~ 44739801 (+) |
| AMCG00017102 | grm2,LOC106565576 | coding | downstream | 414420 | 44867914 ~ 44876540 (+) |
| G18127 | NA | non-coding | upstream | 57672 | 44387443 ~ 44387949 (+) |
| G18125 | NA | non-coding | upstream | 68393 | 44376993 ~ 44377228 (+) |
| G18084 | NA | non-coding | upstream | 244583 | 44116966 ~ 44201038 (+) |
| G18077 | NA | non-coding | upstream | 342222 | 44102026 ~ 44103399 (+) |
| G17987 | LOC107575789 | non-coding | upstream | 945145 | 43500170 ~ 43500476 (+) |
| G18186 | NA | non-coding | downstream | 169873 | 44623367 ~ 44714164 (+) |
| G18196 | usp4 | non-coding | downstream | 215929 | 44669423 ~ 44670878 (+) |
| G18197 | NA | non-coding | downstream | 217798 | 44671292 ~ 44671870 (+) |
| G18255 | NA | non-coding | downstream | 532302 | 44985796 ~ 44986081 (+) |
| G18302 | NA | non-coding | downstream | 789990 | 45243484 ~ 45243983 (+) |
| AMCG00017078 | LOC106565757 | other | upstream | 307690 | 44126214 ~ 44137931 (+) |
| G17697 | NA | other | upstream | 2047834 | 42391297 ~ 42397787 (+) |
| AMCG00016979 | NA | other | upstream | 5191131 | 39239073 ~ 39254490 (+) |
| G17193 | NA | other | upstream | 5941989 | 38496051 ~ 38503632 (+) |
| AMCG00016934 | acly,aclya,LOC103369716,LOC108273769 | other | upstream | 9241389 | 35158597 ~ 35204232 (+) |
| G18192 | NA | other | downstream | 201158 | 44654652 ~ 44656098 (+) |
| AMCG00017099 | cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 | other | downstream | 495540 | 44949034 ~ 44961601 (+) |
| AMCG00017167 | NA | other | downstream | 4918528 | 49372022 ~ 49382218 (+) |
| AMCG00017173 | NA | other | downstream | 4949037 | 49402531 ~ 49403845 (+) |
| AMCG00017183 | NA | other | downstream | 5259973 | 49713467 ~ 49727567 (+) |
