AMCG00017087


Basic Information

Item Value
gene id AMCG00017087
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 44565920 ~ 44566162 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017087
ATGGGCTGCACAGTCAGTGCCGAAGACAAAGCCGCAGCCGAGCGGTCCAAGATGATCGATAAAAACCTCCGGGAAGATGGGGAGAAGGCTGCCCGGGAGgtgaagctgctgctgctgggtaAGGAGGCAGGGGAGCTCCCTCTGCCCTGCTTATTGCGCTTTCATGCTGTCCATCTTGGAGGCTGTCGCGTAGGACTTGCTCGGCAGAGGAAGCAGAAATGGTGGTTGTTTCTTAGGGACTGA

Function

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017087 True 243 mRNA 0.58 1 44565920 44566162

Neighbor

gene id symbol gene type direction distance location
AMCG00017086 gnai2b,LOC108271854,LOC107723915,LOC107587570,LOC107696468,LOC107595419 coding downstream 62670 44483611 ~ 44503250 (-)
AMCG00017085 NA coding downstream 107366 44456778 ~ 44458554 (-)
AMCG00017077 NA coding downstream 440011 44102018 ~ 44125909 (-)
AMCG00017074 LOC103360486 coding downstream 652497 43881278 ~ 43913423 (-)
AMCG00017075 gnat1,LOC108271583,LOC108231337,LOC108424115,LOC103133111,LOC102214189,LOC100706288,LOC102793896 coding downstream 693825 43857493 ~ 43872095 (-)
AMCG00017089 NA coding upstream 7362 44573524 ~ 44600280 (-)
AMCG00017094 NA coding upstream 67410 44633572 ~ 44634705 (-)
AMCG00017095 NA coding upstream 73925 44640087 ~ 44651849 (-)
AMCG00017093 NA coding upstream 96257 44662419 ~ 44684879 (-)
AMCG00017092 emc3,LOC101173295,LOC106583189,LOC101079695 coding upstream 119454 44685616 ~ 44691949 (-)
G18164 NA non-coding downstream 177925 44387443 ~ 44387995 (-)
G18156 NA non-coding downstream 188699 44376997 ~ 44377221 (-)
G18101 NA non-coding downstream 427378 44136188 ~ 44138542 (-)
G18066 NA non-coding downstream 674013 43837177 ~ 43891907 (-)
G18015 NA non-coding downstream 932498 43633221 ~ 43633422 (-)
G18219 NA non-coding upstream 233292 44799454 ~ 44829026 (-)
G18352 NA non-coding upstream 1286900 45853062 ~ 45916620 (-)
G18364 NA non-coding upstream 1535798 46101960 ~ 46102188 (-)
G18366 NA non-coding upstream 1536100 46102262 ~ 46106593 (-)
G18405 NA non-coding upstream 1873907 46440069 ~ 46454396 (-)
AMCG00017067 sumf1 other downstream 906318 43633770 ~ 43659602 (-)
AMCG00017060 NA other downstream 1257294 43305697 ~ 43308626 (-)
AMCG00017061 NA other downstream 1279317 43280237 ~ 43286603 (-)
AMCG00017051 NA other downstream 1591487 42948991 ~ 42974433 (-)
G17842 NA other downstream 1701304 42808711 ~ 42864616 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other upstream 87293 44653455 ~ 44656905 (-)
AMCG00017105 srgap3 other upstream 552128 45118290 ~ 45161137 (-)
AMCG00017158 NA other upstream 3922965 48489127 ~ 48494407 (-)
AMCG00017178 NA other upstream 4921035 49487197 ~ 49494144 (-)
AMCG00017232 NA other upstream 6618069 51184231 ~ 51212373 (-)

Expression


Co-expression Network