AMCG00017102 (grm2,LOC106565576)


Basic Information

Item Value
gene id AMCG00017102
gene name grm2,LOC106565576
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 44867914 ~ 44876540 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017102
ATGGGGGTCTCCTGTATTCTACGCCTCCTGCTTCTTCACATCCTGGTGCAGGTGGCGCTGCCCACCTCCAGTTACAACACAGGCACCAAGCGGGAGATTACTGTTGAGGGGGACCTTGTGATTGGAGGGCTCTTCCCTGTCCACGAGAAAGGAGAAGGGATGGAAGACTGTGGGAAGATAAATGAGCAGCGAGGAATCCAGCGCCTAGAGGCCATGCTTCTGGCTTTGGATGAGATCAACAATGACAGTAAGCTTTTGCCTGGCATCAAGCTTGGTGCCCACATCCTGGACACCTGCTCCAAAGACACCTACGCCCTAGAACAGTCCCTGGAGTTCGTGCGAGCCTCCCTGACCAAAGTAGATGAGACGGAGTACATTTGTCCTGATGGCTCGTATGCTGTTCATGATGACTTCCCTTTGGCTATCTCTGGGGTCATCGGTGGCTCTTACAGTGATGTGTCCATACAGaagatgaaaagaagaaaagaagaagaagaagatgaaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaactaa

Function

symbol description
grm2 Predicted to enable group II metabotropic glutamate receptor activity and scaffold protein binding activity. Predicted to be involved in G protein-coupled glutamate receptor signaling pathway and regulation of glutamatergic synaptic transmission. Predicted to act upstream of or within several processes, including chemical synaptic transmission; glutamate homeostasis; and regulation of protein kinase B signaling. Predicted to be located in neuron projection. Predicted to be part of astrocyte projection and axon. Predicted to be integral component of postsynaptic membrane.

NR:

description
PREDICTED: metabotropic glutamate receptor 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017102 True 585 mRNA 0.49 2 44867914 44876540

Neighbor

gene id symbol gene type direction distance location
AMCG00017096 NA coding upstream 128113 44715391 ~ 44739801 (+)
AMCG00017090 LOC103399082 coding upstream 153814 44692983 ~ 44714100 (+)
AMCG00017088 LOC100694221,LOC104965620,LOC102796420,LOC101486183,LOC103385919 coding upstream 209000 44656787 ~ 44658914 (+)
AMCG00017084 NA coding upstream 390124 44468119 ~ 44477790 (+)
AMCG00017083 NA coding upstream 414420 44445621 ~ 44453494 (+)
AMCG00017097 grm2,LOC105017167,LOC106565576,LOC106583186 coding downstream 5325 44881865 ~ 44891870 (+)
AMCG00017098 NA coding downstream 25926 44902466 ~ 44923634 (+)
AMCG00017103 NA coding downstream 56516 44933056 ~ 44934249 (+)
AMCG00017104 NA coding downstream 343574 45220114 ~ 45227676 (+)
AMCG00017113 NA coding downstream 1066510 45943050 ~ 46096926 (+)
G18186 NA non-coding upstream 153750 44623367 ~ 44714164 (+)
G18197 NA non-coding upstream 196044 44671292 ~ 44671870 (+)
G18196 usp4 non-coding upstream 197036 44669423 ~ 44670878 (+)
G18127 NA non-coding upstream 479965 44387443 ~ 44387949 (+)
G18125 NA non-coding upstream 490686 44376993 ~ 44377228 (+)
G18255 NA non-coding downstream 109256 44985796 ~ 44986081 (+)
G18302 NA non-coding downstream 366944 45243484 ~ 45243983 (+)
G18316 NA non-coding downstream 650204 45526744 ~ 45527005 (+)
G18330 NA non-coding downstream 905657 45782197 ~ 45782467 (+)
G18357 NA non-coding downstream 1142801 46019341 ~ 46021345 (+)
G18192 NA other upstream 211816 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 729983 44126214 ~ 44137931 (+)
G17697 NA other upstream 2470127 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 5613424 39239073 ~ 39254490 (+)
G17193 NA other upstream 6364282 38496051 ~ 38503632 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other downstream 72494 44949034 ~ 44961601 (+)
AMCG00017167 NA other downstream 4495482 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 4525991 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 4836927 49713467 ~ 49727567 (+)
G19113 NA other downstream 5675340 50551880 ~ 50552985 (+)

Expression


Co-expression Network