AMCG00017121


Basic Information

Item Value
gene id AMCG00017121
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 46413402 ~ 46415356 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017121
ATGTTAACTCCAGCATTTGACCTGACTCAAGAATCCCATTTCCTCATCATAAACATCCGTGTGCCTTACACCAGAACATCAGAGTTTGACCTCTACATCGACGGCGAAGACTTCAAATTTTACGCCAAGCCATACTTTCTGAGGCAGGCATCTTTACCTTACGAGTTCCCAAGGAGACTGCAGGACAGTATTTTGAAGGACTTGAAATGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017121 True 213 mRNA 0.44 2 46413402 46415356

Neighbor

gene id symbol gene type direction distance location
AMCG00017114 pdzrn3 coding upstream 85689 46312894 ~ 46327713 (+)
AMCG00017112 pdzrn3,LOC107584480,LOC107667029,LOC107680714,LOC106582849 coding upstream 168136 46229049 ~ 46245266 (+)
AMCG00017113 NA coding upstream 316476 45943050 ~ 46096926 (+)
AMCG00017104 NA coding upstream 1185726 45220114 ~ 45227676 (+)
AMCG00017103 NA coding upstream 1479153 44933056 ~ 44934249 (+)
AMCG00017120 NA coding downstream 1041 46416397 ~ 46419842 (+)
AMCG00017117 rybp,rybpb,LOC107599415,LOC107732045,LOC107680715 coding downstream 90971 46506327 ~ 46508536 (+)
AMCG00017119 NA coding downstream 184404 46599760 ~ 46600717 (+)
AMCG00017118 eif4e3,LOC107727004,LOC107681400,LOC107666244,LOC107568047,LOC107705706 coding downstream 195360 46610716 ~ 46621777 (+)
AMCG00017123 NA coding downstream 357119 46772475 ~ 46808666 (+)
G18386 NA non-coding upstream 40996 46371967 ~ 46372406 (+)
G18365 NA non-coding upstream 306884 46105597 ~ 46106518 (+)
G18363 NA non-coding upstream 311779 46101066 ~ 46101623 (+)
G18357 NA non-coding upstream 392057 46019341 ~ 46021345 (+)
G18330 NA non-coding upstream 630935 45782197 ~ 45782467 (+)
G18420 NA non-coding downstream 148614 46563970 ~ 46564202 (+)
G18430 gpr27,LOC106582853,LOC107713489,LOC107599437,LOC106565734 non-coding downstream 190174 46605530 ~ 46608382 (+)
G18462 NA non-coding downstream 502990 46918346 ~ 46920546 (+)
G18464 NA non-coding downstream 515225 46930581 ~ 46930895 (+)
G18470 NA non-coding downstream 613431 47028787 ~ 47038523 (+)
AMCG00017099 cav3,LOC107673475,LOC107749619,LOC107584510,LOC107577493 other upstream 1451801 44949034 ~ 44961601 (+)
G18192 NA other upstream 1757304 44654652 ~ 44656098 (+)
AMCG00017078 LOC106565757 other upstream 2275471 44126214 ~ 44137931 (+)
G17697 NA other upstream 4015615 42391297 ~ 42397787 (+)
AMCG00016979 NA other upstream 7158912 39239073 ~ 39254490 (+)
AMCG00017167 NA other downstream 2956666 49372022 ~ 49382218 (+)
AMCG00017173 NA other downstream 2987175 49402531 ~ 49403845 (+)
AMCG00017183 NA other downstream 3298111 49713467 ~ 49727567 (+)
G19113 NA other downstream 4136524 50551880 ~ 50552985 (+)
G19114 raf1,LOC108276324 other downstream 4144094 50559450 ~ 50563278 (+)

Expression


Co-expression Network