AMCG00017145


Basic Information

Item Value
gene id AMCG00017145
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 48160403 ~ 48169675 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017145
GCTAAAGTAAGCAGTCCAGCACTTTCAAGTGTTAGTATCAGCTCCAGAACAAAATGGAAAGCCTACTCAAGCAACTGTTCTCTGGGCAAGTGTTCTTCTTCATAATAGTCTTGGGCATTGGAGGATCATTTCAAACTGGATTTCATATTACAGTTATCAATTCACCCTCTCCATTCATTAAAAACTTCATCAATGAGAGCTGGACAATGCGTTACGGTGAGCCAATGAGGATGGGAACTGCAAAACTGATCTGGTCGGTCATAGTATCTATTAACTCTGTAGGGGCCCTGTTTGGCGCTATTAGCATGAGATATATTGCTGTACAATTTGGGAGaaaaaaaacaatgttatacaACAATATTCTCAACATTATTGCTGCAGTAATAATGGGTTCAAGCAAAAAGGCCAACtcttttgaaatgattttggTTGCAAGGTTCTTGTATGGCTTTAGTGCAGGAATAGGCTACAACATCCACACCATGTATCTTGGGGAAAGTTCACCAAAGGCATTAAGAGGACTGATGACCCTGACTGTAGCTACGTTCATTTCAGCTGGTAAATTGTCAGGACAACTCATTGGCATcaggcataaGAAACTCTTCAACAGTGATAGCTTTACTTGCTGTACGCGCCTCTGTCTTTCAGCCCTCCAGAGACTCTGGGGAAACAGAgattttaaacttgaaatagAGGAAATGCAGACAGAGCAGGCTGTGATAAATGGTGAAAAGCCAAAAAGTGTTTTGGCCCTCCTGAGAGACAGATCTGTACGCTGGCAGCTCACATCTATGGTGGTGATCCTGACTTCCATTCAGTTTTGTGGAATTTCTGCAATCTCGGCCTACTCGTTCACTGTGTTTCAAGAAGCTGGCATCCCAGAGGATAAAATTCGTTATGTGACACTTGGTGTGGGCGTTTCTGAGGTCCTCACTTCAATCACTTGTCACTCAGTTCCTTGGATACCATATTGCACAGTAtgcttaatttttatttttgtgatatgTTTTAGTATTGGGCCAGcTAGTGTGATACAGCCACTTTCTCATGAAATTTTTATTCAGTCTTCAAGACCAGCTGCTTTTGCTATCATTGGGATGCTCAGATGGATTGGATTTTCGGTGCTTGGACTGGTTTTCCCTTTCTTAATTgattcaattaagcactTCAGCTTCCTGATATTTAGCGCCGTTTGTCTTGTCGGGTCACTTTTTGTCTATTTCATTGTACCTGaaacaaaaggcaaaacaatTCTTGAAATATCAAAGGAATTTAACAACATCAGAGCGTGTGGACATTGCTGTGCAAAGGAAGCAGAAAAAATGCATGAGGTTATTATGACAACAAGGTTTTGAATAGTATCTGCAATGTCTATTGGGATAagtttacataaaaatatgaaagggGATCTTTATCTGATTGCAAATGCCTGATCAAGGAAACCCCTGTTGGAAATTTGTGCAAGTGTTGtttgctgtaaaaataaaataaatgaacacattgatggatttatttatattgactGTCTTATTCAGATGTATGAATTATGTATCATGCATTCTGTACCATATCAGATAGTCCATAGGAATGAAACATGGACTTCTGGACTGTTACtaaaatacactacatggccaaaagtatgtggacacctgaaCATCTCATGGTCTTCACACCACTCCAGCTGATGCTTGGCATCGcacatggtgatcttaggcttgtgtgcagcggctcagccatggaaacccatttcatgaagctcctgaaATGTCATGAACAGTTCTTGAACTGACGTTGTTTCtagaggcagtttggaactcgtGATTGTTGCAACCTGGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017145 True 1838 mRNA 0.40 10 48160403 48169675

Neighbor

gene id symbol gene type direction distance location
AMCG00017146 NA coding downstream 2006 48148754 ~ 48158397 (-)
AMCG00017141 LOC105912243 coding downstream 193812 47965527 ~ 47966591 (-)
AMCG00017139 slc25a26 coding downstream 438143 47669761 ~ 47722260 (-)
AMCG00017136 kbtbd8,LOC107600285,LOC107753780,LOC107557775,LOC107729395,LOC107699793 coding downstream 609805 47542093 ~ 47550598 (-)
AMCG00017137 NA coding downstream 619372 47522782 ~ 47541031 (-)
AMCG00017149 LOC104952051 coding upstream 5537 48175212 ~ 48212486 (-)
AMCG00017153 NA coding upstream 46964 48216639 ~ 48217459 (-)
AMCG00017150 NA coding upstream 55489 48225164 ~ 48232148 (-)
AMCG00017152 NA coding upstream 70409 48240084 ~ 48241492 (-)
AMCG00017148 NA coding upstream 79679 48249354 ~ 48261026 (-)
G18652 NA non-coding downstream 95364 48062312 ~ 48065039 (-)
G18651 NA non-coding downstream 105781 48054208 ~ 48054622 (-)
G18559 NA non-coding downstream 532882 47627263 ~ 47627521 (-)
G18533 suclg2,LOC106583035 non-coding downstream 732318 47426247 ~ 47428085 (-)
G18529 NA non-coding downstream 771582 47387898 ~ 47388821 (-)
G18690 NA non-coding upstream 483 48170158 ~ 48171110 (-)
G18702 NA non-coding upstream 54375 48224050 ~ 48224318 (-)
G18709 NA non-coding upstream 63015 48232690 ~ 48237413 (-)
G18827 NA non-coding upstream 1190993 49360668 ~ 49360937 (-)
G18828 nek4,LOC106565859 non-coding upstream 1191985 49361660 ~ 49361926 (-)
AMCG00017105 srgap3 other downstream 2999266 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 3503498 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 4500801 43633770 ~ 43659602 (-)
AMCG00017060 NA other downstream 4851777 43305697 ~ 43308626 (-)
AMCG00017061 NA other downstream 4873800 43280237 ~ 43286603 (-)
AMCG00017158 NA other upstream 319452 48489127 ~ 48494407 (-)
AMCG00017178 NA other upstream 1317522 49487197 ~ 49494144 (-)
AMCG00017232 NA other upstream 3014556 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 3261012 51430687 ~ 51435239 (-)
G19335 NA other upstream 3275912 51445587 ~ 51449786 (-)

Expression


Co-expression Network