AMCG00017146


Basic Information

Item Value
gene id AMCG00017146
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 48148754 ~ 48158397 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017146
TTTTCAGCAGCTCTTAGAAACGTGACCGGCAGGAGCGGCTTCCTCTCGGCGCTTCCTGGTGCGCGTCTGTGCGTCTGTGCGTCTGCGCGGCCGGCGGGCGGGCGCAAGTCTGATTCAAAGAAAGATAGCAAATGTGCAGCAGGGACTTCAAAAGATCACAACGcttTTCAGAAGTCATCTAAATGCAAAAGCAGAGAACGGGAGGTTGAGTCCATCTTCTCACTGAAGGTCACCCAGGAAAATGATGCCCTCTGCTACAAAGAGTTTCCACGTCCTGCTGTGAGAGCAGCGCTGCGAAACAGAGCTATCCAGCGAAAGAGGAGAGAGATTGAAGAGGTATACAGACAAGACTGTGACACCTTTGGAACTGTGGCAAAAATGCTGATTGCAAAAGACCCGTCTTTGGAGAAACCGATTCAGTTGTCTCTTCAGGAAAACCTACAAGACATTGGTCTGCGCTGTGCGGAGGCCCTGCAGCGCTTCATTGAGGAACATGATTCGAAACAATCCAGCAGCTCTTCACTGTCTCAGCCTTAGCCCTGCGTATGTAGATACTGCACCTTTTCAATTGTTGGTAAAAGGGtgtagaatgtatttttttctggacaATCCTTTCACCTTTTTATGTGCTTTTTGTCATGTAACCTAATTGTCCCCAACATTTGGAAGATAGGGCCACCAAGGGTCCTAATGACAACAGCATTCTTCCAGCAGCCAACTCCTTGTGTATAAATTGCTCTGGTTATGCTCAGCCCATCCAACACATcctctagagcaggggttttcaaactggtcctggtgtaccccctgccctgcttgcttttgttccaactgaggtcttaattacttaattgaatccttaattgaccttacaaagcaatataccattcaattaagtaattaagacctaggttggaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017146 True 919 mRNA 0.47 5 48148754 48158397

Neighbor

gene id symbol gene type direction distance location
AMCG00017141 LOC105912243 coding downstream 182163 47965527 ~ 47966591 (-)
AMCG00017139 slc25a26 coding downstream 426494 47669761 ~ 47722260 (-)
AMCG00017136 kbtbd8,LOC107600285,LOC107753780,LOC107557775,LOC107729395,LOC107699793 coding downstream 598156 47542093 ~ 47550598 (-)
AMCG00017137 NA coding downstream 607723 47522782 ~ 47541031 (-)
AMCG00017132 NA coding downstream 1097348 47047273 ~ 47051406 (-)
AMCG00017145 NA coding upstream 2006 48160403 ~ 48169675 (-)
AMCG00017149 LOC104952051 coding upstream 16815 48175212 ~ 48212486 (-)
AMCG00017153 NA coding upstream 58242 48216639 ~ 48217459 (-)
AMCG00017150 NA coding upstream 66767 48225164 ~ 48232148 (-)
AMCG00017152 NA coding upstream 81687 48240084 ~ 48241492 (-)
G18652 NA non-coding downstream 83715 48062312 ~ 48065039 (-)
G18651 NA non-coding downstream 94132 48054208 ~ 48054622 (-)
G18559 NA non-coding downstream 521233 47627263 ~ 47627521 (-)
G18533 suclg2,LOC106583035 non-coding downstream 720669 47426247 ~ 47428085 (-)
G18529 NA non-coding downstream 759933 47387898 ~ 47388821 (-)
G18690 NA non-coding upstream 11761 48170158 ~ 48171110 (-)
G18702 NA non-coding upstream 65653 48224050 ~ 48224318 (-)
G18709 NA non-coding upstream 74293 48232690 ~ 48237413 (-)
G18827 NA non-coding upstream 1202271 49360668 ~ 49360937 (-)
G18828 nek4,LOC106565859 non-coding upstream 1203263 49361660 ~ 49361926 (-)
AMCG00017105 srgap3 other downstream 2987617 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 3491849 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 4489152 43633770 ~ 43659602 (-)
AMCG00017060 NA other downstream 4840128 43305697 ~ 43308626 (-)
AMCG00017061 NA other downstream 4862151 43280237 ~ 43286603 (-)
AMCG00017158 NA other upstream 330730 48489127 ~ 48494407 (-)
AMCG00017178 NA other upstream 1328800 49487197 ~ 49494144 (-)
AMCG00017232 NA other upstream 3025834 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 3272290 51430687 ~ 51435239 (-)
G19335 NA other upstream 3287190 51445587 ~ 51449786 (-)

Expression


Co-expression Network