Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017152 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 48240084 ~ 48241492 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017152 | True | 324 | mRNA | 0.41 | 3 | 48240084 | 48241492 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017150 | NA | coding | downstream | 7936 | 48225164 ~ 48232148 (-) |
| AMCG00017153 | NA | coding | downstream | 22625 | 48216639 ~ 48217459 (-) |
| AMCG00017149 | LOC104952051 | coding | downstream | 27598 | 48175212 ~ 48212486 (-) |
| AMCG00017145 | NA | coding | downstream | 70409 | 48160403 ~ 48169675 (-) |
| AMCG00017146 | NA | coding | downstream | 81687 | 48148754 ~ 48158397 (-) |
| AMCG00017148 | NA | coding | upstream | 7862 | 48249354 ~ 48261026 (-) |
| AMCG00017151 | NA | coding | upstream | 82323 | 48323815 ~ 48345751 (-) |
| AMCG00017159 | ptprg,LOC107592848 | coding | upstream | 262426 | 48503918 ~ 48559435 (-) |
| AMCG00017160 | LOC107752167 | coding | upstream | 342984 | 48584476 ~ 48587639 (-) |
| AMCG00017168 | LOC105028385,LOC106583015,LOC100136667 | coding | upstream | 1060470 | 49301962 ~ 49318919 (-) |
| G18709 | NA | non-coding | downstream | 2671 | 48232690 ~ 48237413 (-) |
| G18702 | NA | non-coding | downstream | 15766 | 48224050 ~ 48224318 (-) |
| G18690 | NA | non-coding | downstream | 68974 | 48170158 ~ 48171110 (-) |
| G18652 | NA | non-coding | downstream | 175045 | 48062312 ~ 48065039 (-) |
| G18651 | NA | non-coding | downstream | 185462 | 48054208 ~ 48054622 (-) |
| G18827 | NA | non-coding | upstream | 1119176 | 49360668 ~ 49360937 (-) |
| G18828 | nek4,LOC106565859 | non-coding | upstream | 1120168 | 49361660 ~ 49361926 (-) |
| G18829 | NA | non-coding | upstream | 1122257 | 49363749 ~ 49364302 (-) |
| G18830 | NA | non-coding | upstream | 1123714 | 49365206 ~ 49366441 (-) |
| G18831 | NA | non-coding | upstream | 1125989 | 49367481 ~ 49368062 (-) |
| AMCG00017105 | srgap3 | other | downstream | 3078947 | 45118290 ~ 45161137 (-) |
| AMCG00017091 | brk1,BRK1,LOC106565571 | other | downstream | 3583179 | 44653455 ~ 44656905 (-) |
| AMCG00017067 | sumf1 | other | downstream | 4580482 | 43633770 ~ 43659602 (-) |
| AMCG00017060 | NA | other | downstream | 4931458 | 43305697 ~ 43308626 (-) |
| AMCG00017061 | NA | other | downstream | 4953481 | 43280237 ~ 43286603 (-) |
| AMCG00017158 | NA | other | upstream | 247635 | 48489127 ~ 48494407 (-) |
| AMCG00017178 | NA | other | upstream | 1245705 | 49487197 ~ 49494144 (-) |
| AMCG00017232 | NA | other | upstream | 2942739 | 51184231 ~ 51212373 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | upstream | 3189195 | 51430687 ~ 51435239 (-) |
| G19335 | NA | other | upstream | 3204095 | 51445587 ~ 51449786 (-) |
