Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017170 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 49369576 ~ 49370958 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K12946 | SPCS1; signal peptidase complex subunit 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017170 | True | 524 | mRNA | 0.41 | 3 | 49369576 | 49370958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017168 | LOC105028385,LOC106583015,LOC100136667 | coding | downstream | 50657 | 49301962 ~ 49318919 (-) |
| AMCG00017160 | LOC107752167 | coding | downstream | 781937 | 48584476 ~ 48587639 (-) |
| AMCG00017159 | ptprg,LOC107592848 | coding | downstream | 810141 | 48503918 ~ 48559435 (-) |
| AMCG00017151 | NA | coding | downstream | 1023825 | 48323815 ~ 48345751 (-) |
| AMCG00017148 | NA | coding | downstream | 1108550 | 48249354 ~ 48261026 (-) |
| AMCG00017169 | NA | coding | upstream | 5565 | 49376523 ~ 49383368 (-) |
| AMCG00017175 | NA | coding | upstream | 33164 | 49404122 ~ 49447336 (-) |
| AMCG00017174 | nisch | coding | upstream | 84536 | 49455494 ~ 49477304 (-) |
| AMCG00017177 | dusp7,LOC107712495,LOC107677944 | coding | upstream | 208631 | 49579589 ~ 49589402 (-) |
| AMCG00017180 | poc1a,LOC108424582 | coding | upstream | 273189 | 49644147 ~ 49653221 (-) |
| G18832 | NA | non-coding | downstream | 25 | 49368618 ~ 49369551 (-) |
| G18831 | NA | non-coding | downstream | 1514 | 49367481 ~ 49368062 (-) |
| G18830 | NA | non-coding | downstream | 3135 | 49365206 ~ 49366441 (-) |
| G18829 | NA | non-coding | downstream | 5274 | 49363749 ~ 49364302 (-) |
| G18828 | nek4,LOC106565859 | non-coding | downstream | 7650 | 49361660 ~ 49361926 (-) |
| G18945 | LOC105893506,LOC108431510,LOC106566656,LOC107586924,LOC107593103,LOC107704447 | non-coding | upstream | 336708 | 49707666 ~ 49709260 (-) |
| G18961 | NA | non-coding | upstream | 354239 | 49725197 ~ 49725675 (-) |
| G18962 | NA | non-coding | upstream | 355362 | 49726320 ~ 49726935 (-) |
| G18970 | NA | non-coding | upstream | 392239 | 49763197 ~ 49765192 (-) |
| G19030 | atp2b2,LOC107561799,LOC107570616 | non-coding | upstream | 689889 | 50060847 ~ 50071504 (-) |
| AMCG00017158 | NA | other | downstream | 875169 | 48489127 ~ 48494407 (-) |
| AMCG00017105 | srgap3 | other | downstream | 4208439 | 45118290 ~ 45161137 (-) |
| AMCG00017091 | brk1,BRK1,LOC106565571 | other | downstream | 4712671 | 44653455 ~ 44656905 (-) |
| AMCG00017067 | sumf1 | other | downstream | 5709974 | 43633770 ~ 43659602 (-) |
| AMCG00017060 | NA | other | downstream | 6060950 | 43305697 ~ 43308626 (-) |
| AMCG00017178 | NA | other | upstream | 116239 | 49487197 ~ 49494144 (-) |
| AMCG00017232 | NA | other | upstream | 1813273 | 51184231 ~ 51212373 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | upstream | 2059729 | 51430687 ~ 51435239 (-) |
| G19335 | NA | other | upstream | 2074629 | 51445587 ~ 51449786 (-) |
| AMCG00017251 | actr8 | other | upstream | 2475638 | 51846596 ~ 51860267 (-) |
