AMCG00017191


Basic Information

Item Value
gene id AMCG00017191
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 49844467 ~ 49845126 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017191
ATGCTTTGGGAAGAAGAGCTGACCATGTGTGGCAAAGGCATGATGAGCCAGTGGGGGCCTGCTATCGCCACCCAGCCCGGGCCGAAGCTCCAGGACGACTGCGGGAGAGCCGCCAGCAAGCCTCGCTGGCACAAGCGTGGGAGAAGGCCAAGTTACCGGGGCCAGAAGGGCAGAGCACCTGCGCATTATAAgccctactactactacaaccaCAAGCCAGATCGGGCAGCTCTCCGGCCGTCCGGGCTGTCCTTGCGCCCCGTCAACATCCAAGGGAACCGAGCGAAAGGGATGCGGGCCCCGAGGAACACCAACCAGTTCCTGATGCATGAGAAGTACCAGCTGATGCACATGCGCTCCGACTCGGTGGGCACGGACAGCGGCTCCGACTGCGAGCTGGACTTCACGGACATGGACTCGTACCTGGGCGTGCTGGAGAACGCCCGCGGGGGGCTGATGGACAGCCCCGACCTGTCGCCGCGGCCGGCCGCCCGCTTCTGCGCCAGACCGCCGGCCAAGCGCCAGCCTCTCCCCGTCTTCAGCTTCGGCGAGCTGGCCCAGGAGGAGAGCCTGCAGTACTTCCCCTCCGAGCACGACGTGCTGCAGAGCGAGGACTTCATGCAGAGGGACTTCATTGACTTCTGCAGCAAGATCGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017191 True 660 mRNA 0.64 1 49844467 49845126

Neighbor

gene id symbol gene type direction distance location
AMCG00017186 NA coding downstream 109120 49727583 ~ 49735347 (-)
AMCG00017187 NA coding downstream 137946 49697995 ~ 49706521 (-)
AMCG00017179 NA coding downstream 168633 49669201 ~ 49675834 (-)
AMCG00017180 poc1a,LOC108424582 coding downstream 191246 49644147 ~ 49653221 (-)
AMCG00017177 dusp7,LOC107712495,LOC107677944 coding downstream 255065 49579589 ~ 49589402 (-)
AMCG00017200 vgll4,LOC107570332 coding upstream 486645 50331771 ~ 50351799 (-)
AMCG00017199 tamm41,LOC106583779 coding upstream 532139 50377265 ~ 50384569 (-)
AMCG00017203 NA coding upstream 602259 50447385 ~ 50456112 (-)
AMCG00017208 NA coding upstream 678432 50523558 ~ 50526003 (-)
AMCG00017214 raf1,LOC106571905,LOC108427788 coding upstream 726990 50572116 ~ 50593081 (-)
G18970 NA non-coding downstream 79275 49763197 ~ 49765192 (-)
G18962 NA non-coding downstream 117532 49726320 ~ 49726935 (-)
G18961 NA non-coding downstream 118792 49725197 ~ 49725675 (-)
G18945 LOC105893506,LOC108431510,LOC106566656,LOC107586924,LOC107593103,LOC107704447 non-coding downstream 135207 49707666 ~ 49709260 (-)
G18832 NA non-coding downstream 474916 49368618 ~ 49369551 (-)
G19030 atp2b2,LOC107561799,LOC107570616 non-coding upstream 215721 50060847 ~ 50071504 (-)
G19043 LOC103376870 non-coding upstream 310304 50155430 ~ 50155834 (-)
G19049 NA non-coding upstream 342768 50187894 ~ 50190884 (-)
G19055 NA non-coding upstream 425282 50270408 ~ 50270657 (-)
G19081 NA non-coding upstream 484052 50329178 ~ 50331737 (-)
AMCG00017178 NA other downstream 350323 49487197 ~ 49494144 (-)
AMCG00017158 NA other downstream 1350060 48489127 ~ 48494407 (-)
AMCG00017105 srgap3 other downstream 4683330 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 5187562 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 6184865 43633770 ~ 43659602 (-)
AMCG00017232 NA other upstream 1339105 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 1585561 51430687 ~ 51435239 (-)
G19335 NA other upstream 1600461 51445587 ~ 51449786 (-)
AMCG00017251 actr8 other upstream 2001470 51846596 ~ 51860267 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 3013214 52858340 ~ 52866435 (-)

Expression


Co-expression Network