AMCG00017218


Basic Information

Item Value
gene id AMCG00017218
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 50692600 ~ 50694191 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017218
ATGGATCAGCCCGATGCGTGTGATCCCTACAGCCGGCCAGCCCGCAGGACCCAGTGGATCGTGAGCGCCTTGTCCTACCACTACGGACTGGACCGCGGCGTGGAAAACGAGATCATAGTCCTGGCCACCGGTCTGGACCAGTACCTGCAGGAGATCTTCCACCACCTGGACTGCCAGGGAGAGGGCAAGGTCCCCGCCGAAGACTTCAAAATCCTCTGCGATGTGCTGGGGCTGGAGAGCGACGCCGACCTGGAGGAGTGCGCCGGGATCCTGGACGGCGTCCCCCGGGAGCTGAGCTTCAGGCAGTTCCACGCCAAGCTGTGCGGCTACTTCAGCACCAAAGCCGGGGGCCGCTACGACAACGGGCGGCTGCTGGTGGGCAAGGACAGCGAGCACATCGAGACCCAGATCCGCCTCCGGAGCCCTCTGAGGCGCCGGGAGAAGTCGCTGTCCGTCGGCGGTAAAGGGCGAGGCAGCAGGGGCTCTTCCCCGGCGCCGGAGCGGCATGCGTCGGACTGCAGGCAGCTGGGCTCCTGCACACGGGAGTGCTACGAGGAGATCGTGGCCCTGGAAGAGGCTGAGGACAGGATCGTgaagctggaggaggagaacgGCAGCCTGAGGGAGCTGGTGGAGGACATGCGAGCGGCGCTTCAGAGCAGTGATGCCCGGTCGTTGGCACTGCAGGTAGGGTTGTGGAAGAGTCATTCGAAACACATAGCAGAGGAGGGCTGCTTCATAGCTAACAGGAGGCTAACAGCCAAAAAAGACAGCCTGCAGAGCAGCATGAAGAACCTGCAGAGTTTCCTTCGAGAGGTGGAACTGATCCGCAGCTCCAGGGACGGACAGATAGAGGAGGCCATGAGGTTCAATcaggagctggagaaggagcTGAGGAGGTCCCAGGATGCTCTGGCCACCTTGGAGGACTGCAACAGAAGCCTAAAGCGAGAGCAGGGGGAGATGAGGAAGAAGGTGGAGGACGCTCGGCAAGCGGTGCTCAGCAGCTTGGGCAAAGTCAAGGAGCTGGAAGCCAAGGCCAACCACGTGCCCCTCCTCCAGAGACACATCCAGCAGCTGGAGTCGGAGCTCATCTATTACAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017218 True 1107 mRNA 0.62 2 50692600 50694191

Neighbor

gene id symbol gene type direction distance location
AMCG00017220 LOC107581369 coding downstream 13402 50676251 ~ 50679198 (-)
AMCG00017216 NA coding downstream 21236 50670588 ~ 50671364 (-)
AMCG00017213 rab43,LOC107700634,LOC107758163,LOC107675972 coding downstream 28931 50656119 ~ 50663669 (-)
AMCG00017215 LOC108254961,LOC107700631,LOC106571904,LOC106566758,LOC108431553 coding downstream 39646 50643410 ~ 50652954 (-)
AMCG00017214 raf1,LOC106571905,LOC108427788 coding downstream 99519 50572116 ~ 50593081 (-)
AMCG00017221 NA coding upstream 18797 50712988 ~ 50722221 (-)
AMCG00017219 iqsec1b,LOC107551128 coding upstream 37458 50731649 ~ 50753341 (-)
AMCG00017223 iqsec1b,iqsec1,LOC107566873,LOC107727750,LOC101485759 coding upstream 203922 50898113 ~ 50898373 (-)
AMCG00017222 NA coding upstream 222217 50916408 ~ 50955842 (-)
AMCG00017228 wnt7a,LOC107749431,LOC107685644,LOC107727836,LOC108424657,LOC107691337 coding upstream 445647 51139838 ~ 51155195 (-)
G19150 isy1,LOC108431508,LOC107700632,LOC108254962 non-coding downstream 53829 50637315 ~ 50638771 (-)
G19141 NA non-coding downstream 70161 50622181 ~ 50622439 (-)
G19130 NA non-coding downstream 70668 50531201 ~ 50621932 (-)
G19259 NA non-coding upstream 471167 51165358 ~ 51165675 (-)
G19316 NA non-coding upstream 601640 51295831 ~ 51296743 (-)
G19330 NA non-coding upstream 743689 51437880 ~ 51438093 (-)
G19516 NA non-coding upstream 1853546 52547737 ~ 52548050 (-)
G19548 NA non-coding upstream 1954817 52649008 ~ 52665182 (-)
AMCG00017178 NA other downstream 1198456 49487197 ~ 49494144 (-)
AMCG00017158 NA other downstream 2198193 48489127 ~ 48494407 (-)
AMCG00017105 srgap3 other downstream 5531463 45118290 ~ 45161137 (-)
AMCG00017091 brk1,BRK1,LOC106565571 other downstream 6035695 44653455 ~ 44656905 (-)
AMCG00017067 sumf1 other downstream 7032998 43633770 ~ 43659602 (-)
AMCG00017232 NA other upstream 490040 51184231 ~ 51212373 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other upstream 736496 51430687 ~ 51435239 (-)
G19335 NA other upstream 751396 51445587 ~ 51449786 (-)
AMCG00017251 actr8 other upstream 1152405 51846596 ~ 51860267 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 2164149 52858340 ~ 52866435 (-)

Expression


Co-expression Network