Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00017250 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 51863334 ~ 51865422 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0007602 | phototransduction | biological_process |
| GO:0018298 | protein-chromophore linkage | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0009881 | photoreceptor activity | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00017250 | True | 1035 | mRNA | 0.54 | 4 | 51863334 | 51865422 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017249 | chdh | coding | downstream | 25545 | 51830852 ~ 51837789 (-) |
| AMCG00017245 | dcp1a,LOC102792442 | coding | downstream | 150812 | 51693098 ~ 51712522 (-) |
| AMCG00017241 | tkt,LOC106566687 | coding | downstream | 178174 | 51667548 ~ 51685160 (-) |
| AMCG00017244 | LOC104966709 | coding | downstream | 235559 | 51624052 ~ 51627775 (-) |
| AMCG00017242 | NA | coding | downstream | 257749 | 51571356 ~ 51605585 (-) |
| AMCG00017254 | NA | coding | upstream | 158861 | 52024283 ~ 52029687 (-) |
| AMCG00017255 | LOC103367232 | coding | upstream | 227005 | 52092427 ~ 52104090 (-) |
| AMCG00017256 | NA | coding | upstream | 262709 | 52128131 ~ 52140149 (-) |
| AMCG00017257 | NA | coding | upstream | 308440 | 52173862 ~ 52177582 (-) |
| AMCG00017260 | NA | coding | upstream | 347395 | 52212817 ~ 52218105 (-) |
| G19330 | NA | non-coding | downstream | 425241 | 51437880 ~ 51438093 (-) |
| G19316 | NA | non-coding | downstream | 566591 | 51295831 ~ 51296743 (-) |
| G19259 | NA | non-coding | downstream | 697659 | 51165358 ~ 51165675 (-) |
| G19150 | isy1,LOC108431508,LOC107700632,LOC108254962 | non-coding | downstream | 1224563 | 50637315 ~ 50638771 (-) |
| G19141 | NA | non-coding | downstream | 1240895 | 50622181 ~ 50622439 (-) |
| G19516 | NA | non-coding | upstream | 682315 | 52547737 ~ 52548050 (-) |
| G19548 | NA | non-coding | upstream | 783586 | 52649008 ~ 52665182 (-) |
| G19551 | NA | non-coding | upstream | 814531 | 52679953 ~ 52691186 (-) |
| G19604 | NA | non-coding | upstream | 903480 | 52768902 ~ 52769415 (-) |
| G19663 | NA | non-coding | upstream | 1144456 | 53009878 ~ 53010218 (-) |
| AMCG00017251 | actr8 | other | downstream | 3067 | 51846596 ~ 51860267 (-) |
| G19335 | NA | other | downstream | 413548 | 51445587 ~ 51449786 (-) |
| AMCG00017234 | LOC100690894,LOC102799047,LOC102206238 | other | downstream | 428095 | 51430687 ~ 51435239 (-) |
| AMCG00017232 | NA | other | downstream | 650961 | 51184231 ~ 51212373 (-) |
| AMCG00017178 | NA | other | downstream | 2369190 | 49487197 ~ 49494144 (-) |
| AMCG00017292 | tusc2,LOC108433681,LOC104930950 | other | upstream | 992918 | 52858340 ~ 52866435 (-) |
| AMCG00017299 | NA | other | upstream | 1329411 | 53194833 ~ 53215336 (-) |
| G19730 | NA | other | upstream | 1517918 | 53383340 ~ 53387709 (-) |
| AMCG00017313 | NA | other | upstream | 1586696 | 53452118 ~ 53531131 (-) |
| G19808 | NA | other | upstream | 1810661 | 53676083 ~ 53728883 (-) |
