AMCG00017267


Basic Information

Item Value
gene id AMCG00017267
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52384020 ~ 52413911 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017267
ATGTTTAATTCCCAGCACGGCAGCATAGTCTATCTGAAGGAACTCTGTGCTAGTCCTCAAAGGCCAGCTGGAGCAGAACTGAGCAGAGAGGAGCTGGCTACACCGGAGGCACCGCAGAAGGACCAGGACAACCACATCCACCTTCTCATCCAGAAGGCGCTGCTGAACCATAAAGAAAGCCTGCCTGAGGACCCCACAGATGGAGCCCGCGCGGATGAACTGGAGACTGTACCAAAGGTCCCAGCCAAAGAGCTTCTTCAGGAGTGGCATGGCGATGAACAGGATGGCGCCGCCACTAAAATCTGTGCCACTCAAACAGAGATCCTGctgcacagaaacaaacacacctaTGTGCTCACAAGACGAATCAAAAAGGGCTTGATCGTACCGGCCGAGCACTTTCCAGAGGATCAAGGCCAGGCTGAGCAGCAGCAGGGCCCCCACCACTGTCAGCACCACCACGAACCAGAAACGGGAGTGATCAGAACCACTTACAACCTGGACCTGGAGAGAGAACCGCAGTTGAACTTCACGCTGCTGGTGGTGCGAGCCTTCAACCCGATCAAGCGAGTCAGCGCCACAGCGACCGTCACCATCACAGTGCTGGACGTCAATGACATGCCTCCCTACTGCACCCCAGCTCTCATTGCAATGTCACTGAGTGAGTCCAAACCTGCAGGAACATCTATTACCTCAGTGAAGTGTGTGGACCCTGACGTGACGGGCAGCATAGTCAATTATACTATCCTTGCTGGCGGCTACTCCAAAGACACGTTCAGCATTCCTATACACGGGGGAAATTTAACTTTGAAGAACATGTTGGACTATGACTCATATGAAGTGGGAAACAATAATTTTCAGTACACGGCCAGTATCATAGTCACAGATAATGGGAAGCCTCCTTTAACAACAACGATCCCGATTTACATAACAGTGACGCCGGTGAACGAGTTTGGCCCCAAGTTCATCAACTGCTCCAACATGTATGTGAATGAGAACAGCCCTCTGGGTACAGTCATCGGCTGGGTCAACTTCACAGACAAGGACTGGCCCTTTAATAACGTGTTGTACAGTATAACAGGGGGAGCTGGTAACAATCCCCTGAAATTCTACATCGACCCTTATACTGGTAAGATCCATGTCCTTTCCCACCTGGACTATGAAAAGATAGCGAGTTACACACTGGAGATACAGGCTGTGGACATGAACGAGTACACCGCCCCAGACCCCCAGATACAGAAGACGGCCACTTGCACTCTTACAGTCTTTGTCGTgTCTTGCTGGTGGCACTATAAGGACCATGGGCTCAGTTTATGCTCAAAGACTAAGATCAAAGAGCGATCAGAGCTCGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017267 True 1356 mRNA 0.51 12 52384020 52413911

Neighbor

gene id symbol gene type direction distance location
AMCG00017253 cacna2d3,LOC103362818 coding upstream 368865 52005220 ~ 52015155 (+)
AMCG00017252 cacna2d3,LOC103362818 coding upstream 398652 51948217 ~ 51985368 (+)
AMCG00017247 NA coding upstream 539166 51838583 ~ 51844854 (+)
AMCG00017248 LOC107743249,LOC106566685 coding upstream 556245 51757725 ~ 51827775 (+)
AMCG00017246 LOC106571974 coding upstream 658492 51723699 ~ 51725528 (+)
AMCG00017275 NA coding downstream 327252 52741163 ~ 52743891 (+)
AMCG00017279 NA coding downstream 343552 52757463 ~ 52760504 (+)
AMCG00017288 NA coding downstream 504141 52918052 ~ 52922397 (+)
AMCG00017290 NA coding downstream 516579 52930490 ~ 52933688 (+)
AMCG00017289 acy1,LOC105933287 coding downstream 522989 52936900 ~ 52951955 (+)
G19465 NA non-coding upstream 267679 52106948 ~ 52116341 (+)
G19366 NA non-coding upstream 812026 51565289 ~ 51571994 (+)
G19292 NA non-coding upstream 1043903 51339913 ~ 51340117 (+)
G19275 NA non-coding upstream 1087302 51295832 ~ 51296718 (+)
G19245 NA non-coding upstream 1245185 51137293 ~ 51138835 (+)
G19515 NA non-coding downstream 133838 52547749 ~ 52548031 (+)
G19588 NA non-coding downstream 383021 52796932 ~ 52802211 (+)
G19591 NA non-coding downstream 437020 52850931 ~ 52854722 (+)
G19617 NA non-coding downstream 444242 52858153 ~ 52863723 (+)
G19641 NA non-coding downstream 519853 52933764 ~ 52935403 (+)
G19114 raf1,LOC108276324 other upstream 1820742 50559450 ~ 50563278 (+)
G19113 NA other upstream 1831035 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 2656453 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 2980175 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 3001802 49372022 ~ 49382218 (+)
AMCG00017280 NA other downstream 400342 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 407150 52821061 ~ 52834042 (+)
G19683 NA other downstream 921998 53335909 ~ 53339655 (+)
G19754 NA other downstream 1089521 53503432 ~ 53536464 (+)
G19829 NA other downstream 1376636 53790547 ~ 53792694 (+)

Expression


Co-expression Network