AMCG00017274


Basic Information

Item Value
gene id AMCG00017274
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52669357 ~ 52670496 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017274
ATGGCTGGCCGAGTGTGGGCCCCGTGGGGACCCTGCAGTCGGCTGCACAGTGGCTTTAAGATGCGCAAGGCCAGCCTGGGCCCGGTTCTGTGCCTGGGGCTGCTCTGCGTGACCGGGCTCGCCCTGCTGTATGTGGAAGCCATCGAGTCCTGGGCCGTGTCCCTGGTCATGACGGGAGTGAGTGTGGAGAGCAGGGGGCATGGGGGCACGTCGAGGGTCAACAAAACCTACAGCGGCCCCCCGAGACGCCAGGCCGTATTCCTCATGCAGCCCAGCCCCTCTGCCTGCAGCCGGGCCAAGCCGTACCTCGTCAACCTGGTCACCACCGCCCCGGCCAACCAGGAGGCGCGGCAGGCCATCAGGAAGTCCTGGGGCGGTGAAACGGAGGTGATGGGTCGCCGGGTCATGACACTATTCCTGGTGGGGTTGACCTCTGACCCAGGCCTGGCCCAGCAGCTCGCCAGGGAGTTTCAGGAGCACCGGGACCTGATCCAGGGACCGTTCTCCGACTCCTACGCCAACCTCACCCTGAAGACCTTGTCTCTGCTGGACTGGGCCCAGCACTTCTGCCCGCAGGCCCGGTTCCTGGCCAAGGTGGATGATGACGTGCTGTTCAGCCCGCGGACCCTGCTGGGGTTCCTGCACCGCTCCGGGGTCGGAGACGGGGACCTTTACCTGGGCCGGGTTCACCTGCGGGTCGCTCCGAACCGGGACTCGCGGAGCAAGCACTACCTGCCCTCGGCGGTGTTCGCGTCGGACACCTTCCCCGAGTACTGCAGCGGCACTGCATACGTGCTCTCGCGCTCGGCCGCCCTCAAGATCGCCGCCGCCGCCGCGGATGTGGGGCTGCTCTACCCGCTGCCGCCGGAGGACGTGTTCGTGGGCCTGTGCGCGCGTGCCGCCGGGCTCTCCCCCTCGCACAGCGCGCTCTTCTCCGGCGGCCCAAACCTGCCCTACAGTCGCTGCTGCTATCAGGCCATGGTGGCGGTGCACCACATCTCCCCCGGGCAGATGACCCGGCTGTGGGCTGATGTCAGGGCAGGCCCGCCGTGCTCGTGGCTGCGACTCCGGGCATCGCTTGGCATCTGCAAAGCTCAGGGGCTGCTGGACACCATCCTGCCCTGGCGCGGGGGCGAGTGA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017274 True 1140 mRNA 0.68 1 52669357 52670496

Neighbor

gene id symbol gene type direction distance location
AMCG00017271 NA coding downstream 31751 52621765 ~ 52637606 (-)
AMCG00017273 NA coding downstream 53299 52609271 ~ 52616058 (-)
AMCG00017272 NA coding downstream 63892 52595680 ~ 52605465 (-)
AMCG00017270 NA coding downstream 102648 52565296 ~ 52566709 (-)
AMCG00017269 NA coding downstream 131103 52522749 ~ 52538254 (-)
AMCG00017278 NA coding upstream 74811 52745307 ~ 52745789 (-)
AMCG00017277 NA coding upstream 75563 52746059 ~ 52751516 (-)
AMCG00017276 NA coding upstream 92615 52763111 ~ 52767644 (-)
AMCG00017284 NA coding upstream 101633 52772129 ~ 52795850 (-)
AMCG00017283 LOC105025252,LOC106572261,LOC106566794,LOC100710477,LOC108425062,LOC101076147,LOC103027457,LOC104949002 coding upstream 133224 52803720 ~ 52806431 (-)
G19548 NA non-coding downstream 4175 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 121307 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1231264 51437880 ~ 51438093 (-)
G19316 NA non-coding downstream 1372614 51295831 ~ 51296743 (-)
G19259 NA non-coding downstream 1503682 51165358 ~ 51165675 (-)
G19551 NA non-coding upstream 9457 52679953 ~ 52691186 (-)
G19604 NA non-coding upstream 98406 52768902 ~ 52769415 (-)
G19663 NA non-coding upstream 339382 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 567710 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 747689 53418185 ~ 53419077 (-)
AMCG00017251 actr8 other downstream 809090 51846596 ~ 51860267 (-)
G19335 NA other downstream 1219571 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1234118 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1456984 51184231 ~ 51212373 (-)
AMCG00017178 NA other downstream 3175213 49487197 ~ 49494144 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 187844 52858340 ~ 52866435 (-)
AMCG00017299 NA other upstream 524337 53194833 ~ 53215336 (-)
G19730 NA other upstream 712844 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 781622 53452118 ~ 53531131 (-)
G19808 NA other upstream 1005587 53676083 ~ 53728883 (-)

Expression


Co-expression Network