AMCG00017275


Basic Information

Item Value
gene id AMCG00017275
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52741163 ~ 52743891 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017275
ATGGCTGCAAAAGAGCGGGGGCCCCTGAGAGCCCTCCTCCTGCTGACCCTGGGGGGGGTCCTTCGCTCCCTGGTGGGAGGTCTGCAGCCCGCGCACCCCCCCCTGCTGCCCGGACAGCCCTTCCTGATGCTCTGGGGGATCCCTGACACCCTGTGCGAGGGTCGCCCGGACCCCAGCGCCTTCGGCATGGTGGTGAAGGGGGGGGGCGCCACACAGAAGTTTGCCATTTTCTACCCAGACACTCTGGGGCTGTACCCCTACTACGACCTCCAGGACCAGCCCGTGGCAGGGGGGCTGCCCCAGCACAGCAGCCTGGACATGCACCTGCTGAAGATCGAGGCCGACGTGACGGCCGCCCTGCCCCCCCCGGACTACGCTGGCCTGGCCGCCATCCACTGGGAGGAGTGGGCGCCGCAGTGGAGCCGGAACCGCGGCAAGAGGGAGATCTACCAGCAGCAGTCGCGCCAGCTGCTTCGGCAGTTCTTCCCCGACTGGACACCCGCCGAGCTGGACAAGTGGGCACAGGTGGACTTCGAGGCTGCCGCCCAGGCCGTGCTGCTGGAGACGCTGCAGGAAGCCCGCAACCTGCGGCCACAAGCCCTCTGGGGCTTCTCTCCATACCCCGACTGCTACAACTCCGGCCCTGGACAGCGCCTGGCCAACTACAGTGGCTGCTGCCCGGCGGCGGAGATGGCGCTGAACGATGAGATGCTGTGGCTATGGAAGAAGTCGGCGGCACTGTACCCCTCCCTGTCACTGGACAAGCTGGTGGGTGGCACCCAGGGGGCGCGTCTCTACTCCTCCAATCAGATCCGAGAAGCGCTACGAGTGGCAGCCCTGGCTGGGACCGCCTACGACCTCCCCGTTTTCCCATTGGTCAAGAGCGTCTACTCCTCCACCAACACCTTCCTGTCCGAGCTGGCAGACTTTGTGCGGGGGGTGCTGGGCCCATACGCGGTGAACGTGACAGTGGCGGCACAGCTGTGCGCAGAGGGGCTGTGCCGGGGGCGTGGCCGGTGCGTGCGCAAGAACCCCGAGGAGCCCGCCTACCTGCACCTGCCTGCGGGCAGCTTCCGGCTCTCGCCCGACCCCAACGGCACCCAGGACAGCCTGCTGGCGCTGGGCGAGCTGCAGCACGGCGACCTGGAGGCCTGGCGCCGCCAATTCCACTGCCAGTGGTACGAGGCCCTGGAGGGCACGGCTGCTGACCAGGTGTCtgtggggtcaggggtcagcagGAAATCTGAGAAGAAGCCCCTGCTGACAGAGAGCCCTATGCTGACCGGGAGCCCCACCCTGATCTTGAGCCCCACCCTGACCTCAAGCCCCACACTGACCGGGAGCCCCACGCTGAACCACGGCGCCCCCTGTCTGCTCTGCGGCAggcccctgctgctgctgctcgggGTCCTGGCCTGCCTACCCGCCTGCGGACTAAGCTGA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017275 True 1443 mRNA 0.68 3 52741163 52743891

Neighbor

gene id symbol gene type direction distance location
AMCG00017267 NA coding upstream 327252 52384020 ~ 52413911 (+)
AMCG00017253 cacna2d3,LOC103362818 coding upstream 726008 52005220 ~ 52015155 (+)
AMCG00017252 cacna2d3,LOC103362818 coding upstream 755795 51948217 ~ 51985368 (+)
AMCG00017247 NA coding upstream 896309 51838583 ~ 51844854 (+)
AMCG00017248 LOC107743249,LOC106566685 coding upstream 913388 51757725 ~ 51827775 (+)
AMCG00017279 NA coding downstream 13572 52757463 ~ 52760504 (+)
AMCG00017288 NA coding downstream 174161 52918052 ~ 52922397 (+)
AMCG00017290 NA coding downstream 186599 52930490 ~ 52933688 (+)
AMCG00017289 acy1,LOC105933287 coding downstream 193009 52936900 ~ 52951955 (+)
AMCG00017297 cacna2d2,LOC107666002,LOC102776731 coding downstream 510776 53254667 ~ 53275017 (+)
G19515 NA non-coding upstream 193132 52547749 ~ 52548031 (+)
G19465 NA non-coding upstream 624822 52106948 ~ 52116341 (+)
G19366 NA non-coding upstream 1169169 51565289 ~ 51571994 (+)
G19292 NA non-coding upstream 1401046 51339913 ~ 51340117 (+)
G19275 NA non-coding upstream 1444445 51295832 ~ 51296718 (+)
G19588 NA non-coding downstream 53041 52796932 ~ 52802211 (+)
G19591 NA non-coding downstream 107040 52850931 ~ 52854722 (+)
G19617 NA non-coding downstream 114262 52858153 ~ 52863723 (+)
G19641 NA non-coding downstream 189873 52933764 ~ 52935403 (+)
G19660 NA non-coding downstream 263269 53007160 ~ 53007531 (+)
G19114 raf1,LOC108276324 other upstream 2177885 50559450 ~ 50563278 (+)
G19113 NA other upstream 2188178 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 3013596 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 3337318 49402531 ~ 49403845 (+)
AMCG00017167 NA other upstream 3358945 49372022 ~ 49382218 (+)
AMCG00017280 NA other downstream 70362 52814253 ~ 52817369 (+)
AMCG00017287 NA other downstream 77170 52821061 ~ 52834042 (+)
G19683 NA other downstream 592018 53335909 ~ 53339655 (+)
G19754 NA other downstream 759541 53503432 ~ 53536464 (+)
G19829 NA other downstream 1046656 53790547 ~ 53792694 (+)

Expression


Co-expression Network