AMCG00017277


Basic Information

Item Value
gene id AMCG00017277
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52746059 ~ 52751516 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017277
GCCTGACTCACTGAACCTTAACCTGATATTATGTGACAAGAGCACAGCAGTGACTTGTGTTGTGTGACGGGGGGGCTGGACCAGCCATGGCTGCTGCTCTGTGCCGAGTCAATGCTAAGCTGTGGGCTGAAGAGGAggctgaagaggaagaggaggaggaggaggagagacaggTGGCCAGGTCTCCCATCTCTCCGCTGGGCTGTGCCGTGTCCCGCTGTGCTGCCCTGCTCCTCGCCCAGGTGCTGCAGGTGGTGCTGTGCCAGGGTGCCAAGCAGGCGGTGCCCCCTGTGCTGCCCGGGGAGCCCTTCCTGGTGTACTGGAATGCGCCCACCCAACAGTGCCACATCCGGCATGGGGCGCCTCTCCCCCTGCGTGGGTACGGCATTGTGGCCAACCCCGATCAGGCCTTCTCTGGCAATCGCCTCACCATCTTCTACCTGGACCAGCTGGGCCTGTACCCCTACTACAACCGCGGCGGGCAGCCGGTGAACGGTGGGTGCCCCCAGAATGCCAGCCTGCGGGCACACAGTGAGAAGATGATCGGCGATGTGCAGCGCGCCCTGCCCTGGCCCAGCTTCTCCGGCCTGGCCGTGGTGGACTGGGAGGAGTGGCGGCCACAGTGGGAGCGCAACTGGGCCAGCAAGGACGTGTACCAGCGCAAGTCCCGGGAGCTTGTCCACGCGCTGCACCCGCACTGGCCCCCTGGCAAGGTGGAGAAACAGGCCATCTGGGAGTTTGACTCATCGGCACAGCAGTTCCTTGTGGAGACACTGCGTCAGGGCCGGCGCCTGCGCCCGGCGGGGCTGTGGGGCCTGTACCTGTTCCCCGACTGCTACAACCACGAGTACCAGCGCGGCCTGCACAACTACACTGGCCACTGTCCCCCTCTGGAGCTGCGGCGCAACGACGCCCTGGGCTGGCTGTTCGCGGAGAGCAAGGCGCTGTACCCCTCGGTGTACCTGGTGGAGGCGCTGCGCTCCTCGCCCCAGGGCCGGCTGTTTGTGCGGGCACGGGTCCAAGAGGCCCTGAGGGTGGCGGACTCCACTGAGTCGCCCACTGCGCTGCCCGTCTTCGTCTACAGCCGCCCCTTCTACGCCTACTCCCTGACGCCCCTGACACTGATGGATCTGGTGTCCAGTATTGGTGAGAGTGCAGCGCTGGGGGCCAGTGGAGTGCTCACTCTGGGTCCCTACGTGGCCAACGTCACCACGGCGGCTCGCCTGTGTAGCCAGCAGCTGTGCAGCAGCAGGGGGCGCTGTGTGCGCCGGGACCCCGAGGCCGACGCCTTCCTGCACCTCGATAGCCAGAGCTTCTCCATCGCGGTGCAGCCAGGGGGGGGGCGGGTCTCGGTGCGTGGGGAGCTCAGCCGGGCTGCCAGGGCAACGATGCGCAGCGCCTTCCAGTGCCAGTGCTACCAGGGCTGGGCTGGGGACAAATGCAAGAGCCTGGCGCACAGACCCAAGCCCGGCAGcaccctcctcttcctcctcctcctcctcgctgaCCTGAGCACCCTGTGGTCTCTCCCAATCTGA

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017277 True 1538 mRNA 0.66 5 52746059 52751516

Neighbor

gene id symbol gene type direction distance location
AMCG00017278 NA coding downstream 270 52745307 ~ 52745789 (-)
AMCG00017274 NA coding downstream 75563 52669357 ~ 52670496 (-)
AMCG00017271 NA coding downstream 108453 52621765 ~ 52637606 (-)
AMCG00017273 NA coding downstream 130001 52609271 ~ 52616058 (-)
AMCG00017272 NA coding downstream 140594 52595680 ~ 52605465 (-)
AMCG00017276 NA coding upstream 11595 52763111 ~ 52767644 (-)
AMCG00017284 NA coding upstream 20613 52772129 ~ 52795850 (-)
AMCG00017283 LOC105025252,LOC106572261,LOC106566794,LOC100710477,LOC108425062,LOC101076147,LOC103027457,LOC104949002 coding upstream 52204 52803720 ~ 52806431 (-)
AMCG00017286 NA coding upstream 60331 52811847 ~ 52814845 (-)
AMCG00017282 NA coding upstream 66523 52818039 ~ 52821117 (-)
G19551 NA non-coding downstream 54873 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 80877 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 198009 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1307966 51437880 ~ 51438093 (-)
G19316 NA non-coding downstream 1449316 51295831 ~ 51296743 (-)
G19604 NA non-coding upstream 17386 52768902 ~ 52769415 (-)
G19663 NA non-coding upstream 258362 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 486690 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 666669 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 1102467 53853983 ~ 53854628 (-)
AMCG00017251 actr8 other downstream 885792 51846596 ~ 51860267 (-)
G19335 NA other downstream 1296273 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1310820 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1533686 51184231 ~ 51212373 (-)
AMCG00017178 NA other downstream 3251915 49487197 ~ 49494144 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 106824 52858340 ~ 52866435 (-)
AMCG00017299 NA other upstream 443317 53194833 ~ 53215336 (-)
G19730 NA other upstream 631824 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 700602 53452118 ~ 53531131 (-)
G19808 NA other upstream 924567 53676083 ~ 53728883 (-)

Expression


Co-expression Network