AMCG00017278


Basic Information

Item Value
gene id AMCG00017278
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52745307 ~ 52745789 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017278
ATGATGACAGTTTGTCATCGTATGCAGCACTGCCACCCAAACACACTGTACCAAAGACCAGACCTGCTGAAACATACTAACGCACTGCCCCACGCACTGCCCAACACACTGCCCAATGCACTGCCCAAAACACTGCCCAACACACTGCCCAACACACTGCCCAACGCACTGCCCAACGCACTGCCCAACATGCTGTACCACGCACTGCCCAACGCACTGCCCAACACACTGCCCAACGCACTGCCCTCCAGCTACACTGTGGCCCCGCTGCTGCAGTGCACAGACCCTGCGGTGAGGGCTGCCCCTTGGCTCAGTCTTGGGCAGTCGTTCATGATGAATATCCAGGCAGGGTTACAGTTAAAGTAG

Function

GO:

id name namespace
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034704 calcium channel complex cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017278 True 366 mRNA 0.57 2 52745307 52745789

Neighbor

gene id symbol gene type direction distance location
AMCG00017274 NA coding downstream 74811 52669357 ~ 52670496 (-)
AMCG00017271 NA coding downstream 107701 52621765 ~ 52637606 (-)
AMCG00017273 NA coding downstream 129249 52609271 ~ 52616058 (-)
AMCG00017272 NA coding downstream 139842 52595680 ~ 52605465 (-)
AMCG00017270 NA coding downstream 178598 52565296 ~ 52566709 (-)
AMCG00017277 NA coding upstream 270 52746059 ~ 52751516 (-)
AMCG00017276 NA coding upstream 17322 52763111 ~ 52767644 (-)
AMCG00017284 NA coding upstream 26340 52772129 ~ 52795850 (-)
AMCG00017283 LOC105025252,LOC106572261,LOC106566794,LOC100710477,LOC108425062,LOC101076147,LOC103027457,LOC104949002 coding upstream 57931 52803720 ~ 52806431 (-)
AMCG00017286 NA coding upstream 66058 52811847 ~ 52814845 (-)
G19551 NA non-coding downstream 54121 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 80125 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 197257 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1307214 51437880 ~ 51438093 (-)
G19316 NA non-coding downstream 1448564 51295831 ~ 51296743 (-)
G19604 NA non-coding upstream 23113 52768902 ~ 52769415 (-)
G19663 NA non-coding upstream 264089 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 492417 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 672396 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 1108194 53853983 ~ 53854628 (-)
AMCG00017251 actr8 other downstream 885040 51846596 ~ 51860267 (-)
G19335 NA other downstream 1295521 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1310068 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1532934 51184231 ~ 51212373 (-)
AMCG00017178 NA other downstream 3251163 49487197 ~ 49494144 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 112551 52858340 ~ 52866435 (-)
AMCG00017299 NA other upstream 449044 53194833 ~ 53215336 (-)
G19730 NA other upstream 637551 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 706329 53452118 ~ 53531131 (-)
G19808 NA other upstream 930294 53676083 ~ 53728883 (-)

Expression


Co-expression Network