AMCG00017282


Basic Information

Item Value
gene id AMCG00017282
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52818039 ~ 52821117 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017282
ATGGGGGCCTCACAGCCAGGGCACGGGGGACTGGTGCCCAGCACTCCTCACAAcctggaggagagagggagaggaacgAcccccacccccccggtgTCTCTGCAGGAGAAGCTGACGCTGACGCGGGCGCTGGCAGCTCAGGGCGCCACCATCCAGGAGCTGAACACGGTGCGCACGGCCCTGTCGGAGCTGAAGGGCGGGGGTCTGGCCCGCTGCGCTCGCCCGGCACAGGTAGTCGGTCTGATCCTGTCAGATGTGATCGGGGACCCGGTGGATCTGATTGCCAGCGGCCCCACGGTGCCCAGCCTTCCCCGTCCCCGGGACGCCCGCGCCGTGCTGCAGCGCTATGGGCTGGAGGCCTCGCTGCCCCCCTCCGTGCAGGACGTCCTGAGCCGGCTGGAGGGGCAGGAGGACAGTGAGGGCAGGGATGGCACGGACAGAGCGCCCCAGCCACACAACGTGGTGATTGGTTCCAACACGCTGGCACTGCAGGCGGCCGGGCGGCGGGCGCAGGAGCTGGGTCTGTGCCCAGTGCTGCTGTCCCCAGGGGTGTGTGGGGACGTGGGGGCCGTGGCGCGGCTCTACGCCCTGCTGGCGGCCTTCGCCTGTGCGGCGCGTTCCCCCGGCGGACCCCCGGCCCACCTGACCCCGGCCCTGCTTGAGTTGGGCCCACAGGTGGGCGTGGAGGCCTGGGACCTGATGCGCACCCTGCAGGCGCTGGAGCAGAGCCGGGGCGCTGTGTGCCTGCTGGCCGGCGGGGAGCCCACGGTGCAGCTGCGGGGGGGAGGCCGTGGGGGGCGCAACCAGGAGCTGGCGCTGCGTGTGGGGCTGGCGCTTGGCCGCGAGGAGCTCCCCCTGCAGGGCGTGGTGTTCCTGAGCGGCGGCACGGACGGGCAAGACGGGCCCACGGAGGCGGCCGGCGCAGTGGCGGACACGGCACTGGAGCAGGAGGCCCGAGAGCAGGGCCTGGACCCCGACACCAGCCTGCGGGAGAACgactccttctccttcttccagCGGCTCTCCGCCGGCCGGCGCCTGCTGTGCCCCGGCCTCACTGGCACCAACGTCATGGATGtgcacctgctgctgctgcccccccaGCCCTGA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0000166 nucleotide binding molecular_function
GO:0008887 glycerate kinase activity molecular_function

KEGG:

id description
K11529 gck, gckA, GLYCTK; glycerate 2-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017282 True 1110 mRNA 0.73 3 52818039 52821117

Neighbor

gene id symbol gene type direction distance location
AMCG00017286 NA coding downstream 3194 52811847 ~ 52814845 (-)
AMCG00017283 LOC105025252,LOC106572261,LOC106566794,LOC100710477,LOC108425062,LOC101076147,LOC103027457,LOC104949002 coding downstream 11608 52803720 ~ 52806431 (-)
AMCG00017284 NA coding downstream 22189 52772129 ~ 52795850 (-)
AMCG00017276 NA coding downstream 50395 52763111 ~ 52767644 (-)
AMCG00017277 NA coding downstream 66523 52746059 ~ 52751516 (-)
AMCG00017285 NA coding upstream 17386 52838503 ~ 52840644 (-)
AMCG00017281 NA coding upstream 23747 52844864 ~ 52853582 (-)
AMCG00017295 NA coding upstream 47210 52868327 ~ 52881013 (-)
AMCG00017296 NA coding upstream 63358 52884475 ~ 52900125 (-)
AMCG00017294 NA coding upstream 83223 52904340 ~ 52912643 (-)
G19604 NA non-coding downstream 48624 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 126853 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 152857 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 269989 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1379946 51437880 ~ 51438093 (-)
G19663 NA non-coding upstream 188761 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 417089 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 597068 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 1032866 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 1043793 53864910 ~ 53868777 (-)
AMCG00017251 actr8 other downstream 957772 51846596 ~ 51860267 (-)
G19335 NA other downstream 1368253 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1382800 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1605666 51184231 ~ 51212373 (-)
AMCG00017178 NA other downstream 3323895 49487197 ~ 49494144 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 37223 52858340 ~ 52866435 (-)
AMCG00017299 NA other upstream 373716 53194833 ~ 53215336 (-)
G19730 NA other upstream 562223 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 631001 53452118 ~ 53531131 (-)
G19808 NA other upstream 854966 53676083 ~ 53728883 (-)

Expression


Co-expression Network