AMCG00017285


Basic Information

Item Value
gene id AMCG00017285
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52838503 ~ 52840644 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017285
ATGACCCCCAGCTTAATGGAATCGCAGGAACTCACAGCAAGGATGTCCGCCCTGGTGCTGCTCAGCCTGTGGGCCGTGGGGGGCGCTGTGGCCATCCAGCAGACCCGCATGCCTCTGTTGCCCAATGTGCCCTTCCTGACGGTGTGGAATGCCCCGACAGAGTCCTGCAAGACCAAGTATGGGGTGGACCTGGACCTCAGCCTGTTTGACATCGTGCTGAACCAGAACCAGAGCTTCATGGGGGACAATATCACCATCTTCTACGTGGACAAGCTGGGCCGGTACCCTTTCTACACGCTCCAGGGGGAGCCGGTGAACGGGGGGGTGCCCCAGAACGCCAGCCTGTTGGAACACCTGGACTTGGCTTGGGCCGACATTGAGCGCTACATCCCGCACGCTGCCTTCTCGGGCCTGGCAGTGGTGGACTGGGAGAGTTGGCGGCCGCTGTGGGTGCGGAACTGGGACTCCAAGGAGGTTTACTGCAACGCCTCCCGGACTCTGGTGCAGCAGAAGCATCCCGACTGGCCTCCTTCTAAAGTGGACAGCGAAGCCCAGAGGGAGTTCCAGGAGGCGGGCCGGGCGTTCATGAATCGCACGCTGCAGCTGGGCCGCGAGATGAGGCCCGGCGGCTGGTGGGGGTTCTACGGGATGCCCGGCTGCTACAACTACCAGTACAAGAATGCCTCGCTGAACTACACCGGGCAGTGTCCGGAGGTGGAGATGAGGAGGAACGAGGAGCTGGGCTGGCTGTGGAACGTCAGCTCTGCGCTGTATCCCAGCATCTACCTGGAGTTGGAGTTGCGCGGCCGGGGCGAGGCTATCCGGCGGTACACGCAGTACAGCGTCCTGGAGGCCCAGCGGTGCGCGGGACAGGTCACTCCGGTCAGCCCCCCGGTGCTGCCCTATGCCCGCATAGCCTACACCTACTCCCTGGAGTTCCTTTCTCAGGAGGACTTGGTTCACACTGTCGGGGAGGCTGCAGCGCTGGGAGCGGCAGGTATCGTGCTCTGGGGGAACGCAGACTATGCAAAATCTCAGGCTGTGTGTGAAGAAATAAAAGGCTATACGGACGGGACTCTGGGTAATTACATTGTGAACGTGACCACGGCTGCTGTGGTGTGCAGCCGGGTCCGGTGCTCGAGTCGTGGGCGCTGCCAGAGGCAGGACAGTGGCTCGAAGGCTTACCTCCACCTGGATCCACTCAGCTGGACAGTCCTGTCCAAGCCGGGGCCCAAGGGCATGGTGCACAGTGTGCAGGGGCAGCTGAATAAGGAGGAAGCATTGAGCATGGAAGCCAAGTTTAAATGCAGCTGCTACCAGGGTTGGGCTGGGAGGCACTGTAAAAAGCGACTGTAG

Function

GO: NA

KEGG:

id description
K01197 hya; hyaluronoglucosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017285 True 1356 mRNA 0.62 3 52838503 52840644

Neighbor

gene id symbol gene type direction distance location
AMCG00017282 NA coding downstream 17386 52818039 ~ 52821117 (-)
AMCG00017286 NA coding downstream 23658 52811847 ~ 52814845 (-)
AMCG00017283 LOC105025252,LOC106572261,LOC106566794,LOC100710477,LOC108425062,LOC101076147,LOC103027457,LOC104949002 coding downstream 32072 52803720 ~ 52806431 (-)
AMCG00017284 NA coding downstream 42653 52772129 ~ 52795850 (-)
AMCG00017276 NA coding downstream 70859 52763111 ~ 52767644 (-)
AMCG00017281 NA coding upstream 4220 52844864 ~ 52853582 (-)
AMCG00017295 NA coding upstream 27683 52868327 ~ 52881013 (-)
AMCG00017296 NA coding upstream 43831 52884475 ~ 52900125 (-)
AMCG00017294 NA coding upstream 63696 52904340 ~ 52912643 (-)
AMCG00017293 nprl2 coding upstream 72179 52912823 ~ 52917944 (-)
G19604 NA non-coding downstream 69088 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 147317 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 173321 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 290453 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1400410 51437880 ~ 51438093 (-)
G19663 NA non-coding upstream 169234 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 397562 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 577541 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 1013339 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 1024266 53864910 ~ 53868777 (-)
AMCG00017251 actr8 other downstream 978236 51846596 ~ 51860267 (-)
G19335 NA other downstream 1388717 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1403264 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1626130 51184231 ~ 51212373 (-)
AMCG00017178 NA other downstream 3344359 49487197 ~ 49494144 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 17696 52858340 ~ 52866435 (-)
AMCG00017299 NA other upstream 354189 53194833 ~ 53215336 (-)
G19730 NA other upstream 542696 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 611474 53452118 ~ 53531131 (-)
G19808 NA other upstream 835439 53676083 ~ 53728883 (-)

Expression


Co-expression Network