AMCG00017286


Basic Information

Item Value
gene id AMCG00017286
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52811847 ~ 52814845 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017286
ATGCCGTGTGGAGCAGCGGCCGCCCGCGGTGCCGTCAGCAGGGCGAGACGGGCCCGGCGGCCACAGCCTCCATTTTCCACCGAGAGACGCTGTCTGCTGTCACACTGTCATCCCACGCTGGCAGATTCGTTACACcGGACTGTCCAGCGAGCAGCCTCCACTGACCGGGTCTGGGGGCTGATAGGGAGTAGCTTACGTCTCTGGCTGCCTGCGTTGTGGCTGACGAGCCCCGCACTGCCCCGCACGGCCCCGCACGGCCCCCCGGCGCGTCCCTCTCCCGCCCCCTCGCTGTTCTTACCCCCGGCGTGCCCGCGCAGGCGTGGCCCCGGCTCGTCCCCGCCGCGCGCGCCCGCCCTCCTCGGGGGCGCGCGTTGCTCCCGCCCCGTGCGCGCCCCCGGCAGCCGGCTCATTGTAGCGGCGCGGCGAGCGGAGACGGACGGACCGGCGCGCTGTCATCGAACTGCAGGTAAGAGCGCCGACCCGACCCGGCCCGACCCGGGGCCTCCTGCCCGTGGGCGCCCGGCGCGTCTGGACGCTTTCTGCGGGGTTTCTGAGCGGCGCTTCCGCCCTGCGCCGGCCGGGAGCCGCTTTGCTGCGAGGAAACTCACCCAGCGCGACGGCCATCAAACTTTTGCCCCGGCCTCATCCGCCGCGGGGACGGGCGCAGGCGAGGCGCCGGTGGAAGTGAGGGAGTCGCGTTTGTCACGCGTGTTAAAAGAGCGTGATCAGTGCGGGAAACCCGCCCGGAGAGAGGGGCTCAGTCCCGGCGCTGAGCCGTTTGCGTGTCTGTCGCGAAACGCGTTTCCTGTGCGGGTCCCGGGTCTTTATTTGGGGTCTGACTTCATCCGTATCGCCGAAAGCGGTCGAGCCCGGAGCCCGGACTCCGGCACCGCGGGGCGGGGGCAGTGCATGCGTGCAATCCCCTCCAAAAGTATCTCCAGTTTAACTACTGAAGCCCCGGCTTTCAGAAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017286 True 975 mRNA 0.70 2 52811847 52814845

Neighbor

gene id symbol gene type direction distance location
AMCG00017283 LOC105025252,LOC106572261,LOC106566794,LOC100710477,LOC108425062,LOC101076147,LOC103027457,LOC104949002 coding downstream 5416 52803720 ~ 52806431 (-)
AMCG00017284 NA coding downstream 15997 52772129 ~ 52795850 (-)
AMCG00017276 NA coding downstream 44203 52763111 ~ 52767644 (-)
AMCG00017277 NA coding downstream 60331 52746059 ~ 52751516 (-)
AMCG00017278 NA coding downstream 66058 52745307 ~ 52745789 (-)
AMCG00017282 NA coding upstream 3194 52818039 ~ 52821117 (-)
AMCG00017285 NA coding upstream 23658 52838503 ~ 52840644 (-)
AMCG00017281 NA coding upstream 30019 52844864 ~ 52853582 (-)
AMCG00017295 NA coding upstream 53482 52868327 ~ 52881013 (-)
AMCG00017296 NA coding upstream 69630 52884475 ~ 52900125 (-)
G19604 NA non-coding downstream 42432 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 120661 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 146665 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 263797 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1373754 51437880 ~ 51438093 (-)
G19663 NA non-coding upstream 195033 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 423361 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 603340 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 1039138 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 1050065 53864910 ~ 53868777 (-)
AMCG00017251 actr8 other downstream 951580 51846596 ~ 51860267 (-)
G19335 NA other downstream 1362061 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1376608 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1599474 51184231 ~ 51212373 (-)
AMCG00017178 NA other downstream 3317703 49487197 ~ 49494144 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other upstream 43495 52858340 ~ 52866435 (-)
AMCG00017299 NA other upstream 379988 53194833 ~ 53215336 (-)
G19730 NA other upstream 568495 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 637273 53452118 ~ 53531131 (-)
G19808 NA other upstream 861238 53676083 ~ 53728883 (-)

Expression


Co-expression Network