AMCG00017287


Basic Information

Item Value
gene id AMCG00017287
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52821061 ~ 52834042 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017287
ATGTCTGCGGCACAGTGGGCGCGGGAGCTGTTCGGTGTGGCTGTGAAGGCCGTGCAGCCGGATAGCGTGCTGAGCTCCAGCCTGACCCTGCAGGGGGGACGCCTCCTGGTAGGGGGGCAGAGCTTCGCCATCGACCACAACCTGTACCTGGTGGGCTTCGGCAAGGCGGTGCTGGGCATGGCGGCGGCAGCTGAAAGGGTGGTGGGGGGTCACCTGGTGCGCGGCGTGGGGGCGATGCACAACCTGCCCGACAGCGCGGCACAGCAGGCGGCCCAGGACATCCAGAAGCTGGCCAGCGGACTGGGGGAGGGGGACCTGCTGCTGGCGCTGGTCTCGGGTATGAGCCGCCTCCCCACCTCACCACACACTAGCCTTGTGAACTTGTGA
>TU24309
caggTTGTGAGGAGTGCTGGGCACCAGTCCCCCGTGCCCTGGCTGTGAGGCCCCCATGGCCCTGtcccccctctgtctctcgCGCTCCggtcctctctctctgctgaggTCCCTGTCCCGGTCCCAGGGGGTGCCGGCACGGGCGATGTCTGCGGCACAGTGGGCGCGGGAGCTGTTCGGTGTGGCTGTGAAGGCCGTGCAGCCGGATAGCGTGCTGAGCTCCAGCCTGACCCTGCAGGGGGGACGCCTCCTGGTAGGGGGGCAGAGCTTCGCCATCGACCACAACCTGTACCTGGTGGGCTTCGGCAAGGCGGTGCTGGGCATGGCGGCGGCAGCTGAAAGGGTGGTGGGGGGTCACCTGGTGCGCGGCGTGGTCAGTGTGCCTCACGGCATACAGGACGCCCTCAGGAGGGAGGGCAGAGGTGAGATGCTGTTGAGTGCAGACAGCCGTGTGCGCGTCATGGAGGGGGCGATGCACAACCTGCCCGACAGCGCGGCACAGCAGGCGGCCCAGGACATCCAGAAGCTGGCCAGCGGACTGGGGGAGGGGGACCTGCTGCTGGCGCTGGTCTCGGgagtgggctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017287 False 387 mRNA 0.68 2 52821206 52822263
TU24309 True 587 TUCP 0.69 3 52821061 52834042

Neighbor

gene id symbol gene type direction distance location
AMCG00017279 NA coding upstream 60557 52757463 ~ 52760504 (+)
AMCG00017275 NA coding upstream 77170 52741163 ~ 52743891 (+)
AMCG00017267 NA coding upstream 407150 52384020 ~ 52413911 (+)
AMCG00017253 cacna2d3,LOC103362818 coding upstream 805906 52005220 ~ 52015155 (+)
AMCG00017252 cacna2d3,LOC103362818 coding upstream 835693 51948217 ~ 51985368 (+)
AMCG00017288 NA coding downstream 84010 52918052 ~ 52922397 (+)
AMCG00017290 NA coding downstream 96448 52930490 ~ 52933688 (+)
AMCG00017289 acy1,LOC105933287 coding downstream 102858 52936900 ~ 52951955 (+)
AMCG00017297 cacna2d2,LOC107666002,LOC102776731 coding downstream 420625 53254667 ~ 53275017 (+)
AMCG00017301 NA coding downstream 452387 53286429 ~ 53302089 (+)
G19588 NA non-coding upstream 18850 52796932 ~ 52802211 (+)
G19515 NA non-coding upstream 273030 52547749 ~ 52548031 (+)
G19465 NA non-coding upstream 704720 52106948 ~ 52116341 (+)
G19366 NA non-coding upstream 1249067 51565289 ~ 51571994 (+)
G19292 NA non-coding upstream 1480944 51339913 ~ 51340117 (+)
G19591 NA non-coding downstream 16889 52850931 ~ 52854722 (+)
G19617 NA non-coding downstream 24111 52858153 ~ 52863723 (+)
G19641 NA non-coding downstream 99722 52933764 ~ 52935403 (+)
G19660 NA non-coding downstream 173118 53007160 ~ 53007531 (+)
G19664 NA non-coding downstream 190583 53024625 ~ 53024934 (+)
AMCG00017280 NA other upstream 3692 52814253 ~ 52817369 (+)
G19114 raf1,LOC108276324 other upstream 2257783 50559450 ~ 50563278 (+)
G19113 NA other upstream 2268076 50551880 ~ 50552985 (+)
AMCG00017183 NA other upstream 3093494 49713467 ~ 49727567 (+)
AMCG00017173 NA other upstream 3417216 49402531 ~ 49403845 (+)
G19683 NA other downstream 501867 53335909 ~ 53339655 (+)
G19754 NA other downstream 669390 53503432 ~ 53536464 (+)
G19829 NA other downstream 956505 53790547 ~ 53792694 (+)
AMCG00017325 nckipsd other downstream 960584 53794626 ~ 53805796 (+)
G19854 NA other downstream 1019865 53853907 ~ 53855839 (+)

Expression


Co-expression Network