AMCG00017294


Basic Information

Item Value
gene id AMCG00017294
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 52904340 ~ 52912643 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00017294
ttttaatattttgtatttgtcataCAATGGGTGGGTGAACTTACTCTCCTCAAACAGAGTCTGGCTCTCTGAAAATTGAACTAACCAGGTTATTGCAACAATGCTTTAATGCctatttaattttagttctgACATTATAGCTATGGTCCTGGGTGCCTTAAAGAGTGCTATTGTAGtgtctgttaaattaaaatcgATAAGCTACAAAGCTAcagatttattgttttgtacacACTTCGGGCTTCATGCTGTGCTTTCCGCACCAGAGCAGTCGCGCACTACCTGTGCAGGTGAATCAGTGGATCACACTTTCCTTTGAGCCGGATCAGTGGATCACACCTGCCATCGATCCAGTCCAGTCAATCGATCTGCCTCTCCGGGTCGCAGCGCGCAtgcgtgtgttgtgtgtgctgccACGGCAACGGTGAAGCGTGTTGTGGAGGAAACGAAGCGAGCGGCGCCTTTGTTGTCCTCCTTTACACAGCTTTCTCTTCCTTTACTCCGCTTTCTGCTCCTGTACACACCGCCCTGCCGTCGGGTGAGAAGCTATGGAGTCGGCGGCTGCGGTGCTGCTGCCCGGCGAGGTGGAGGGCTTCGTGCGCGGTCTGGAGCGCTTCCCGCTGCGGGACATTGGCAGCCCCAGGTGGTTCAGGCAGCACGAATACGTGCAGAAGCTGAACATGCAGGCGATCCTCAGCGCGTCCTGCGGCCAAGAGGAGCTGGTGAAGGAGCAGCTGGTATCGGTGGGGAAGATTCCCACTCTGGTCCATGAGATGATCTCAGTAGAGATTTGGAAGCAGAAGGTGCTGCCCGTGCTGAGTCGGCTGCGGGATTTCAACCCCAAAAGCACCTTCCCCTTATACATGGTGGACTCCTGCGAGTCTGCAGAGCCGGCTGTCCTGGATTTGATTGATTACTGCCACCGCAAGCTGACCCTGCTGGCGGCGCGAAACACTGCGGGAGACGCCGCGGCTGAGGACGGGCTGCCACTTGGGCTCGGCGCGCAGACGGACTCCACTCTGCAGGAGCTGCTGAGACTGAGCTCAGCGCTGGAGTTCGACATCGCGCTGAAGGCCCTGTCTGTCCTGCGCTACGTCTCCGACCATATTGACAGTTTCAGCCTGAGTGCCCTGACGAGACTGCTGAGCACCCACAACCTGCCCTGTGTGCTGGTGCACCTGGTGGAGACCTGCCCCTGGAGCCGCCGCTCGAAAGGTCAGTTAGAGAAGTACGTGGACGGGAAGTGGCTCCAGATCCCCAGAGAGGACCAGCTGAAAATGACCAAGCTGGACGGCCAGGTGTGGATCGCTCTGCTCAACCTGCTGCTCAGACCCGACTGCCAGAAGAAATACGACTTCAACAGCTTCAACAAAAGCCAGCTCTTAAAGGTTCTGATCGACCAGCTGCCCAATCTCAGTGAGCTCCAGGTGTTCCTCAGCCACCTGTCCATCACAGACTCCGCACCCCCCAAACAGGGCCTTGTTCTGGAGCAGATCCCGGAGATGTGGAATGACATCATGAAGGAGAACTCGGGCAAGTGGAAGGCCATCGCCAAGTACCAGGTGAAGGAAGCGTTCAACCCCTCTGACGAGGATCTGCGGCAGCAGGCTCACCGGCTGGCCCAGACCTACAGCCTGGACGTGATGGAGAGCCTCGTCCCAGACAAGCCCCGGTGCGGCTTCTGCGGCTCCGAAGCATCCAAGCGCTGCTCCCGCTGCCAGGGCGAGTGGTACTGCCACAGGCAGTGCCAGGTCAAGCACTGGCCCAAACACAAGAGAGCGTGTGAGCTGATGGCTGAGGCTGTTCATCAGACGCAGGAGGACCGGAAGAGCGCAAACTGAAATGCCAGGGCGGCAGGAGGAGAGCTCGTCTGTGAGCTCCACAAGAAGGACGCTCAGGTCGGAGCCTGTTCATACTCGGACCATCTGGATGAAGCTACCAGTACCTTATAAGTCTGGAGGTTAAAGTTGGAAACCATGTGTTTAAACCACGGTTGTCAGTGATAAGTGAGTCACTAGTTGACAAATTGGCAGGTTTCGTGTGACAGTTGAAAAGTGTGTGGAAAATGCATATTGTAAATGtgctctttaaaaatacacatgcaCAAAACATG

Function

GO: NA

KEGG:

id description
K24030 ZMYND10; zinc finger MYND domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00017294 True 2113 mRNA 0.55 11 52904340 52912643

Neighbor

gene id symbol gene type direction distance location
AMCG00017296 NA coding downstream 4215 52884475 ~ 52900125 (-)
AMCG00017295 NA coding downstream 23327 52868327 ~ 52881013 (-)
AMCG00017281 NA coding downstream 50758 52844864 ~ 52853582 (-)
AMCG00017285 NA coding downstream 63696 52838503 ~ 52840644 (-)
AMCG00017282 NA coding downstream 83223 52818039 ~ 52821117 (-)
AMCG00017293 nprl2 coding upstream 180 52912823 ~ 52917944 (-)
AMCG00017291 tmem115 coding upstream 12180 52924823 ~ 52929839 (-)
AMCG00017298 NA coding upstream 369822 53282465 ~ 53286478 (-)
AMCG00017302 LOC107696462 coding upstream 426863 53339506 ~ 53343302 (-)
AMCG00017309 NA coding upstream 480065 53392708 ~ 53396408 (-)
G19604 NA non-coding downstream 134925 52768902 ~ 52769415 (-)
G19551 NA non-coding downstream 213154 52679953 ~ 52691186 (-)
G19548 NA non-coding downstream 239158 52649008 ~ 52665182 (-)
G19516 NA non-coding downstream 356290 52547737 ~ 52548050 (-)
G19330 NA non-coding downstream 1466247 51437880 ~ 51438093 (-)
G19663 NA non-coding upstream 97235 53009878 ~ 53010218 (-)
G19687 NA non-coding upstream 325563 53238206 ~ 53238409 (-)
G19741 NA non-coding upstream 505542 53418185 ~ 53419077 (-)
G19873 NA non-coding upstream 941340 53853983 ~ 53854628 (-)
G19875 NA non-coding upstream 952267 53864910 ~ 53868777 (-)
AMCG00017292 tusc2,LOC108433681,LOC104930950 other downstream 37905 52858340 ~ 52866435 (-)
AMCG00017251 actr8 other downstream 1044073 51846596 ~ 51860267 (-)
G19335 NA other downstream 1454554 51445587 ~ 51449786 (-)
AMCG00017234 LOC100690894,LOC102799047,LOC102206238 other downstream 1469101 51430687 ~ 51435239 (-)
AMCG00017232 NA other downstream 1691967 51184231 ~ 51212373 (-)
AMCG00017299 NA other upstream 282190 53194833 ~ 53215336 (-)
G19730 NA other upstream 470697 53383340 ~ 53387709 (-)
AMCG00017313 NA other upstream 539475 53452118 ~ 53531131 (-)
G19808 NA other upstream 763440 53676083 ~ 53728883 (-)
G19824 NA other upstream 850355 53762998 ~ 53764376 (-)

Expression


Co-expression Network